chr18 : 59,176,733 – 59,177,291
558 bp 9 TFs 2 linked genes
This 558 bp open chromatin element is linked to SEC11C and LMAN1 and is bound by 9 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SEC11C 37.1 kb Distal Multiome
LMAN1 182.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,171,733 – 59,182,291
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
9 transcription factors
Source
Cell type
FOXA1 1 dataset
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 225 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 420 bp overlap
ChIP DE DE-GATA4-2 525 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 429 bp overlap
ChIP DE DE-GATA6-2 403 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 519 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 442 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 376 bp overlap
HMGA1 1 dataset
ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 197 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 297 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 192 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 548 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 321 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 558 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 558 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 302 bp overlap