chr18 : 59,705,578 – 59,705,939
361 bp 14 TFs 2 linked genes
This 361 bp open chromatin element is linked to CCBE1 and ENSG00000267774 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CCBE1 8.2 kb Proximal Proximity
ENSG00000267774 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,700,578 – 59,710,939
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 150 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 97 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 361 bp overlap
ChIP DE DE-FOXA2-2 361 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 361 bp overlap
ChIP DE DE-GATA4-2 361 bp overlap
ChIP foregut GSE117136.GATA4.foregut 361 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 182 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 361 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 270 bp overlap
ChIP foregut GSE117136.GATA6.foregut 361 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 195 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 213 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 361 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 171 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 277 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 254 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 143 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 92 bp overlap
TP63 2 datasets
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 72 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 64 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 260 bp overlap