chr18 : 79,567,133 – 79,567,644
511 bp 54 TFs 2 linked genes
This 511 bp open chromatin element is linked to CTDP1 and NFATC1 and is bound by 54 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CTDP1 112.5 kb Distal Multiome
NFATC1 171.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:79,562,133 – 79,572,644
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 220 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 457 bp overlap
ASH2L 4 datasets
ChIP H1 ENCFF399KAM 296 bp overlap
ChIP H1 ENCFF399KAM 65 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 290 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 73 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 180 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 96 bp overlap
BRD2 5 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 184 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 74 bp overlap
ChIP LPS141 GSE111253.BRD2.LPS141 109 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 111 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 149 bp overlap
BRD3 1 dataset
ChIP LPS141 GSE111253.BRD3.LPS141 60 bp overlap
BRD4 8 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 70 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 159 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 77 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 258 bp overlap
ChIP OCI-AML3 GSE104745.BRD4.OCI-AML3 511 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 55 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 511 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 113 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 206 bp overlap
CEBPB 1 dataset
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 143 bp overlap
CTCF 2 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 205 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 188 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 179 bp overlap
ChIP BLaER1 ENCFF093OYK 209 bp overlap
ChIP BLaER1 ENCFF335XTP 116 bp overlap
DNMT3B 1 dataset
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 313 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 86 bp overlap
ESR1 8 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 121 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 213 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 182 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 212 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 178 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 89 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 59 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 108 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 154 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 135 bp overlap
ChIP A-1847 GSE95643.EZH2.A-1847 227 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 86 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 81 bp overlap
JUN 8 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 104 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 269 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 337 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 115 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 56 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 311 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 263 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 149 bp overlap
KAT7 2 datasets
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 159 bp overlap
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 108 bp overlap
KDM1A 2 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 141 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 127 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 74 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 191 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 252 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 173 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 69 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 67 bp overlap
OGG1 5 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 200 bp overlap
ChIP HEK293 GSE89017.OGG1.HEK293 236 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 511 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 511 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 195 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 191 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 74 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 156 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 511 bp overlap
RAD21 4 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 167 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 58 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 127 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 125 bp overlap
RBPJ 1 dataset
ChIP HCC1599 GSE116871.RBPJ.HCC1599 96 bp overlap
RELA 3 datasets
ChIP HEK293_15min GSE89017.RELA.HEK293_15min 261 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 71 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 55 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 86 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 92 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 194 bp overlap
SKI 3 datasets
ChIP HL-60 GSE107553.SKI.HL-60 252 bp overlap
ChIP HL-60 GSE107553.SKI.HL-60 182 bp overlap
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 159 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 279 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 177 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 511 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 511 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 511 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 511 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 511 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 511 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 511 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 475 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 151 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 201 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 365 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 511 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 187 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 59 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 381 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 198 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 511 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 96 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 148 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 108 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 178 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 394 bp overlap
STAT3 3 datasets
ChIP A139 GSE85579.STAT3.A139 126 bp overlap
ChIP A139 GSE85579.STAT3.A139 231 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 168 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 110 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 195 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 157 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 179 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 176 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 141 bp overlap