chr19 : 991,298 – 991,443
145 bp 100 TFs 2 linked genes
This 145 bp open chromatin element is linked to WDR18 and GRIN3B and is bound by 100 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
WDR18 7.0 kb Proximal Proximity
GRIN3B 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:986,298 – 996,443
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 115 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 134 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 116 bp overlap
ChIP K562 ENCFF025NLP 145 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 89 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 63 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 145 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 145 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 80 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 145 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 87 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 78 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 59 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 59 bp overlap
CBFB 1 dataset
ChIP K562 ENCFF145YWG 145 bp overlap
CBX5 1 dataset
ChIP K-562 ENCSR272JAT.CBX5.K-562 104 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 53 bp overlap
CHD2 2 datasets
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 134 bp overlap
ChIP K-562 ENCSR000EHD.CHD2.K-562 145 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 53 bp overlap
CTCF 2 datasets
ChIP MM1-S GSE43743.CTCF.MM1-S 56 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 114 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 145 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 102 bp overlap
EGR1 6 datasets
ChIP Ishikawa ENCFF550FKT 145 bp overlap
ChIP Ishikawa ENCSR000BSQ.EGR1.Ishikawa 130 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 106 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 127 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 145 bp overlap
ChIP K562 ENCFF006PJY 145 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF496AKI 145 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 137 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 115 bp overlap
ESR1 3 datasets
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 144 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 53 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 53 bp overlap
FIP1L1 5 datasets
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 76 bp overlap
ChIP K-562 GSE120104.FIP1L1.K-562 79 bp overlap
ChIP K562 ENCFF002WKI 119 bp overlap
ChIP K562 ENCFF002WKI 145 bp overlap
ChIP K562 ENCFF363ZMN 145 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 145 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 145 bp overlap
GTF2F1 2 datasets
ChIP K-562 GSE120104.GTF2F1.K-562 145 bp overlap
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 145 bp overlap
HCFC1 1 dataset
ChIP K-562 ENCSR000EFN.HCFC1.K-562 126 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 105 bp overlap
ChIP K562 ENCFF928TKZ 145 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 115 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 94 bp overlap
HDGF 3 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 145 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 120 bp overlap
ChIP K562 ENCFF682FBH 145 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 145 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 50 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 126 bp overlap
HMGN3 2 datasets
ChIP K562 ENCFF083BIJ 145 bp overlap
ChIP K562 ENCFF083BIJ 109 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 145 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 145 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGT.IRF1.K-562 139 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 99 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 128 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 145 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 145 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 145 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 145 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 145 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 137 bp overlap
ChIP HEK293 ENCFF588INF 145 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 145 bp overlap
MAF 1 dataset
Motif DE_24h DE_24h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_24h DE_24h-MAFA_MA1521.2 13 bp overlap
MAX 6 datasets
ChIP Ishikawa ENCFF064TDQ 145 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 135 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 128 bp overlap
ChIP K562 ENCFF110LJS 145 bp overlap
ChIP K562 ENCFF524IJO 145 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 145 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 145 bp overlap
ChIP K562 ENCFF333ZIV 145 bp overlap
ChIP K562 ENCFF982GSZ 145 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 94 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 98 bp overlap
MYC 3 datasets
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 97 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 63 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 65 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 132 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 122 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 145 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 77 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 74 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 130 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 145 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 145 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 125 bp overlap
ChIP K562 ENCFF167YID 145 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 137 bp overlap
NRF1 4 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 145 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 131 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 130 bp overlap
ChIP K562 ENCFF130SGK 145 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 53 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 145 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 144 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 117 bp overlap
ChIP K562 ENCFF382QWQ 98 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 89 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 145 bp overlap
ChIP K562 ENCFF648YPL 145 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 93 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 110 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 126 bp overlap
RB1 2 datasets
ChIP K-562 ENCSR670JDQ.RB1.K-562 112 bp overlap
ChIP K562 ENCFF627ZBG 145 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 115 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 99 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 142 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 145 bp overlap
RUNX1 3 datasets
ChIP ME-1 GSE46044.RUNX1.ME-1 53 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 145 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 145 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 134 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 117 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 72 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 121 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 129 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 78 bp overlap
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 56 bp overlap
SP1 3 datasets
ChIP HEK293T ERP007114.SP1.HEK293T 145 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 119 bp overlap
ChIP K562 ENCFF365HQT 145 bp overlap
SP2 1 dataset
ChIP HEK293T ERP007114.SP2.HEK293T 93 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 145 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 145 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 145 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 132 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 145 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 145 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 110 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 71 bp overlap
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 145 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 145 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 113 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 117 bp overlap
YY1 1 dataset
ChIP GM12892 ENCSR000BLT.YY1.GM12892 103 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 145 bp overlap
ZBTB7A 4 datasets
ChIP Ishikawa ENCFF191NFH 145 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 130 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 140 bp overlap
ChIP K562 ENCFF579ZGM 145 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 113 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 145 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 51 bp overlap
ChIP K562 ENCFF352SDL 145 bp overlap
ZNF331 1 dataset
Motif DE_24h DE_24h-ZNF331_MA1726.2 10 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 145 bp overlap