chr19 : 7,541,199 – 7,541,410
211 bp 91 TFs 2 linked genes
This 211 bp open chromatin element is linked to PNPLA6 and ENSG00000268614 and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PNPLA6 7.0 kb Proximal Proximity
ENSG00000268614 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:7,536,199 – 7,546,410
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 89 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 89 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 129 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 124 bp overlap
BCL11A 5 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 211 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 94 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 58 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 211 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 211 bp overlap
BHLHE40 3 datasets
ChIP IMR-90 ENCFF312JYK 141 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 91 bp overlap
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 74 bp overlap
BRD4 3 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 80 bp overlap
ChIP hESC GSE33281.BRD4.hESC 72 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 126 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 51 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 211 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 174 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 135 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 211 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 117 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 83 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 180 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 183 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 96 bp overlap
EGR1 9 datasets
ChIP HCT116 ENCFF456NPQ 211 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 102 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 97 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 67 bp overlap
ChIP K562 ENCFF006PJY 90 bp overlap
ChIP K562 ENCFF113OPQ 188 bp overlap
ChIP K562 ENCFF895KGN 166 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 102 bp overlap
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 88 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 128 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 118 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 211 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 134 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 152 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 104 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 105 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR000BLO.GABPA.K-562 51 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 100 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 65 bp overlap
ChIP erythroblast ENCFF867JAR 211 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 211 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 124 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 139 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 130 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 144 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 200 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 200 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 201 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 211 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 211 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 172 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 211 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 211 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 72 bp overlap
HMGN3 1 dataset
ChIP K562 ENCFF083BIJ 211 bp overlap
JUN 6 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 108 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 149 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 211 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 104 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 127 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 164 bp overlap
KLF1 4 datasets
ChIP HEK293 ENCFF159QSW 211 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 211 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 211 bp overlap
ChIP HUDEP-2_S4 GSE97671.KLF1.HUDEP-2_S4 111 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 177 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 144 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 211 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 168 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 158 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 211 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 211 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 94 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 191 bp overlap
KMT2A 1 dataset
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 211 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 166 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 71 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 211 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 211 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 103 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 133 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 77 bp overlap
MED26 3 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 158 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 104 bp overlap
ChIP HEK293T GSE121024.MED26.HEK293T 53 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 193 bp overlap
MYC 1 dataset
ChIP Kelly GSE138295.MYC.Kelly 158 bp overlap
MYCN 5 datasets
ChIP BE2C GSE80151.MYCN.BE2C 211 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 103 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 185 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 211 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 137 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 124 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 211 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 170 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 155 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 204 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 134 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 143 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 211 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 190 bp overlap
PCBP1 5 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 155 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 155 bp overlap
ChIP K562 ENCFF121LOV 211 bp overlap
ChIP K562 ENCFF121LOV 211 bp overlap
ChIP K562 ENCFF121LOV 58 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 211 bp overlap
RBFOX2 1 dataset
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 89 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 61 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 72 bp overlap
SMARCC1 1 dataset
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 130 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 211 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 127 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 191 bp overlap
ChIP WTC11 ENCFF688PEU 211 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 206 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 211 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 155 bp overlap
SP3 1 dataset
ChIP HEK293 ENCSR141PZA.SP3.HEK293 211 bp overlap
SP4 2 datasets
ChIP HEK293 GSE76494.SP4.HEK293 198 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 190 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 81 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 211 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 211 bp overlap
STAT1 1 dataset
ChIP SET-2_DMSO GSE100566.STAT1.SET-2_DMSO 90 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 211 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 211 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 211 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 169 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 166 bp overlap
TAL1 8 datasets
ChIP CD34 GSE52924.TAL1.CD34 106 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 57 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 56 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 99 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 76 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 79 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 114 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 88 bp overlap
TBP 8 datasets
ChIP H1 ENCFF859IIO 211 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 87 bp overlap
ChIP K-562 GSE55306.TBP.K-562 211 bp overlap
ChIP K562 ENCFF901UYM 184 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 211 bp overlap
ChIP hESC GSE122298.TBP.hESC 119 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 139 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 148 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 211 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 167 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 194 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 100 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 211 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 211 bp overlap
USF1 4 datasets
ChIP K-562 ENCSR000BKT.USF1.K-562 89 bp overlap
ChIP SK-N-SH ENCFF967PDP 133 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 146 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 79 bp overlap
USF2 1 dataset
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 100 bp overlap
YY1 3 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 98 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ChIP K562 ENCFF660QRE 179 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 210 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 113 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 211 bp overlap
ZBTB7A 4 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 211 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 103 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 198 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 82 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 211 bp overlap
ZMYND11 1 dataset
ChIP HeLa GSE51672.ZMYND11.HeLa 155 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 211 bp overlap
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