chr19 : 8,452,486 – 8,452,785
299 bp 34 TFs 2 linked genes
This 299 bp open chromatin element is linked to ENSG00000279827 and HNRNPM and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000279827 6.9 kb Proximal Proximity
HNRNPM 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:8,447,486 – 8,457,785
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 284 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 70 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 85 bp overlap
CTCF 1 dataset
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 120 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 299 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 240 bp overlap
ESR1 1 dataset
ChIP breast_mrnahist ERP002305.ESR1.breast_mrnahist 139 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 233 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 235 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 198 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 299 bp overlap
ChIP DE DE-FOXA2-2 299 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 265 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 299 bp overlap
ChIP DE DE-GATA4-2 299 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 299 bp overlap
ChIP DE DE-GATA6-2 299 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 299 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 299 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 299 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 299 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 51 bp overlap
ChIP liver ENCFF449HPV 79 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 284 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 255 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 284 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 114 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 67 bp overlap
ChIP A-673 GSE119971.MYBL2.A-673 113 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 237 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 61 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 258 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 299 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 79 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 105 bp overlap
ChIP K562 ENCFF196WTG 299 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 299 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 124 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 299 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 299 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 249 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 299 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 299 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 295 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 299 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 82 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SPI1 1 dataset
ChIP K-562 ENCSR000BGW.SPI1.K-562 157 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 179 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 182 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 153 bp overlap