chr19 : 20,248,201 – 20,248,701
500 bp 32 TFs 2 linked genes
This 500 bp open chromatin element is linked to ENSG00000213985 and ENSG00000267383 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000213985 9.0 kb Proximal Proximity
ENSG00000267383 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,243,201 – 20,253,701
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 316 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 67 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 158 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 156 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 109 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 346 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 203 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 500 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 386 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 449 bp overlap
ChIP DE DE-GATA4-2 477 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 485 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 274 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 264 bp overlap
NANOG 6 datasets
ChIP WA01 ERP004238.NANOG.WA01 292 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 172 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 500 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 232 bp overlap
ChIP hESC GSE20650.NANOG.hESC 155 bp overlap
ChIP hESC GSE18292.NANOG.hESC 95 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 415 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POLR2A 2 datasets
ChIP thyroid gland ENCFF979LRR 482 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 387 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 317 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 284 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 326 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 235 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF896IJG 301 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 243 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 381 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 425 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 281 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 182 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 180 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 212 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 326 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 204 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 364 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 132 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP H1 ENCFF524BTL 194 bp overlap