chr19 : 30,219,344 – 30,219,753
409 bp 38 TFs 2 linked genes
This 409 bp open chromatin element is linked to ZNF536 and ENSG00000267223 and is bound by 38 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF536 8.2 kb Proximal Proximity
ENSG00000267223 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:30,214,344 – 30,224,753
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 409 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 2 datasets
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 409 bp overlap
ChIP DE DE-FOXA2-2 409 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCFF485YIB 51 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 381 bp overlap
ChIP DE DE-GATA4-2 409 bp overlap
ChIP foregut GSE117136.GATA4.foregut 406 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 273 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 365 bp overlap
ChIP DE DE-GATA6-2 409 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 55 bp overlap
HSF1 1 dataset
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 115 bp overlap
Hnf1A 1 dataset
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
MEF2B 1 dataset
Motif DE_72h DE_72h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_72h DE_72h-MEF2D_MA0773.1 12 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Pparg::Rxra 1 dataset
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
Prdm15 1 dataset
Motif DE_72h DE_72h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 166 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 231 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
TBR1 1 dataset
Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap
TBX3 1 dataset
Motif DE_72h DE_72h-TBX3_MA1566.3 9 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
ZBTB12 1 dataset
Motif DE_72h DE_72h-ZBTB12_MA1649.2 7 bp overlap
ZEB1 2 datasets
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF140 1 dataset
Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 107 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCFF436CGE 157 bp overlap
ZNF454 1 dataset
Motif DE_72h DE_72h-ZNF454_MA1712.2 17 bp overlap
ZNF675 1 dataset
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF677 1 dataset
Motif DE_72h DE_72h-ZNF677_MA2101.1 12 bp overlap
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