chr19 : 45,497,784 – 45,498,132
348 bp 18 TFs 3 linked genes
This 348 bp open chromatin element is linked to PPM1N, RTN2, and VASP and is bound by 18 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PPM1N 554 bp At TSS Proximity
RTN2 4.6 kb Proximal Proximity
VASP 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:45,492,784 – 45,503,132
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
BRD4 1 dataset
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 124 bp overlap
CREB1 2 datasets
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 57 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 50 bp overlap
EZH2 7 datasets
ChIP GM23248 ENCFF404ZHM 270 bp overlap
ChIP GM23248 ENCFF404ZHM 158 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 112 bp overlap
ChIP astrocyte ENCFF365JTP 174 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 120 bp overlap
ChIP hepatocyte ENCFF552DZB 348 bp overlap
ChIP hepatocyte ENCFF552DZB 321 bp overlap
KDM5B 2 datasets
ChIP K562 ENCFF049WWX 152 bp overlap
ChIP K562 ENCFF049WWX 348 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 75 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 139 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 131 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 193 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 85 bp overlap
SRF 1 dataset
ChIP H1 ENCFF036PEF 225 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 147 bp overlap
ZEB1 1 dataset
ChIP HEK293 ENCSR909HMT.ZEB1.HEK293 260 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 88 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 219 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 166 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 84 bp overlap