chr19 : 45,814,954 – 45,815,368
414 bp 110 TFs 2 linked genes
This 414 bp open chromatin element is linked to RSPH6A and SYMPK and is bound by 110 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RSPH6A at TSS At TSS Proximity
SYMPK 1.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:45,809,954 – 45,820,368
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 249 bp overlap
AGO1 4 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 260 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 265 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 367 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 352 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 414 bp overlap
ChIP HepG2 ENCFF773YDL 414 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 369 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 293 bp overlap
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 391 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 414 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 410 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 287 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 267 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 392 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 158 bp overlap
BRD4 6 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 414 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 185 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 154 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 185 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 191 bp overlap
ChIP hESC GSE33281.BRD4.hESC 66 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 370 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 381 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 232 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 185 bp overlap
CTCF 8 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF414GZI 118 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 98 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 207 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 402 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 187 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 62 bp overlap
ChIP nephron ENCFF589HXU 291 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 131 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 257 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 122 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 175 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 277 bp overlap
ChIP ME-1 GSE46044.ELF1.ME-1 152 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 159 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 125 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 398 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 266 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 92 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 171 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 136 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 58 bp overlap
ESRRA 1 dataset
ChIP WTC11 ENCFF591YCA 320 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 125 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 200 bp overlap
EZH2 1 dataset
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 210 bp overlap
FIP1L1 2 datasets
ChIP K-562 GSE120104.FIP1L1.K-562 365 bp overlap
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 336 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 252 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 358 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 414 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 273 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 145 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 398 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
HNRNPK 5 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 108 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 95 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 119 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 84 bp overlap
ChIP K562 ENCFF954RNO 185 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 123 bp overlap
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 123 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 286 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 383 bp overlap
JUN 2 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 214 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 158 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 220 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 255 bp overlap
KDM4A 3 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 273 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 174 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 205 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 77 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 414 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 230 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 105 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 227 bp overlap
MYBL2 2 datasets
ChIP WTC11 ENCFF166TKT 375 bp overlap
ChIP WTC11 ENCFF166TKT 337 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 290 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 130 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 126 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 242 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 324 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 156 bp overlap
NFYB 1 dataset
ChIP WTC11 ENCFF751ZTQ 330 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 201 bp overlap
OGG1 3 datasets
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 341 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 333 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 335 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 298 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 290 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 247 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 304 bp overlap
POLR2A 5 datasets
ChIP GM12878 ENCFF521FXC 163 bp overlap
ChIP H1 ENCFF566JSR 414 bp overlap
ChIP PFSK-1 ENCFF576NIT 414 bp overlap
ChIP sigmoid colon ENCFF748YVT 244 bp overlap
ChIP spleen ENCFF706IUS 414 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 414 bp overlap
ChIP K562 ENCFF648YPL 414 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 292 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 306 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 283 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 414 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 272 bp overlap
RAD21 1 dataset
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 170 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 395 bp overlap
ChIP HepG2 ENCFF939HTZ 395 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 414 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 414 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 414 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 414 bp overlap
REST 1 dataset
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 183 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 241 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 410 bp overlap
RUNX1 1 dataset
ChIP ME-1 GSE46044.RUNX1.ME-1 120 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 297 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 355 bp overlap
RXRA 1 dataset
ChIP GM12878 ENCSR000BJD.RXRA.GM12878 59 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 414 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 315 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 206 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 115 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 113 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 122 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 170 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 179 bp overlap
SP4 3 datasets
ChIP H1 ENCFF473YOB 414 bp overlap
ChIP H1 ENCFF473YOB 301 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 102 bp overlap
SPI1 1 dataset
ChIP ME-1 GSE46044.SPI1.ME-1 213 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 414 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 334 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 241 bp overlap
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 218 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 367 bp overlap
STAT6 2 datasets
ChIP WTC11 ENCFF271RMR 268 bp overlap
ChIP WTC11 ENCFF271RMR 399 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 377 bp overlap
ChIP H1 ENCFF478SZO 52 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 242 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 157 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 162 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 258 bp overlap
TCF7 1 dataset
ChIP WTC11 ENCFF431UYL 334 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 297 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 292 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 234 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 369 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 312 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 58 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 345 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 247 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 268 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 132 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 128 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 298 bp overlap
ZBTB43 2 datasets
ChIP WTC11 ENCFF058JUB 235 bp overlap
ChIP WTC11 ENCFF058JUB 414 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 235 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 376 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 251 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 198 bp overlap