chr19 : 52,176,705 – 52,176,878
173 bp 26 TFs 3 linked genes
This 173 bp open chromatin element is linked to ZNF836, ENSG00000267827, and ENSG00000267927 and is bound by 26 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF836 5.1 kb Proximal Proximity
ENSG00000267827 5.2 kb Proximal Proximity
ENSG00000267927 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:52,171,705 – 52,181,878
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 135 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 161 bp overlap
CEBPB 3 datasets
ChIP H1 ENCFF871PTR 173 bp overlap
ChIP MCF-7 ENCFF772ZTQ 173 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 100 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 173 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 173 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 146 bp overlap
GATA3 5 datasets
ChIP MCF-7 ENCFF178GBS 173 bp overlap
ChIP MCF-7 ENCFF352QVM 173 bp overlap
ChIP MCF-7 ENCFF437NQS 173 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 173 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 173 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 173 bp overlap
ChIP DE DE-GATA4-2 173 bp overlap
ChIP foregut GSE117136.GATA4.foregut 173 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 173 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 173 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 173 bp overlap
ChIP DE DE-GATA6-2 173 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 173 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 173 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 173 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 173 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 173 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 173 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 173 bp overlap
ChIP foregut GSE117136.GATA6.foregut 173 bp overlap
GRHL2 2 datasets
ChIP HBE GSE46194.GRHL2.HBE 133 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 173 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 173 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCFF329FZB 170 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 173 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 173 bp overlap
ChIP K562 ENCFF236IUS 173 bp overlap
ChIP MCF-7 ENCFF116OCS 173 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 173 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 129 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 173 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 173 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 173 bp overlap
SPDEF 2 datasets
ChIP MCF-7 ENCFF827PZY 173 bp overlap
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 163 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 124 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 173 bp overlap
TCF7L2 1 dataset
ChIP MCF-7 ENCFF219LIX 173 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 164 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 173 bp overlap
YY1AP1 5 datasets
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 173 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 173 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 171 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 173 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 173 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF299BWK 173 bp overlap