chr19 : 53,780,539 – 53,780,815
276 bp 30 TFs 2 linked genes
This 276 bp open chromatin element is linked to ENSG00000269564 and SEPTIN7P8 and is bound by 30 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000269564 6.1 kb Proximal Proximity
SEPTIN7P8 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:53,775,539 – 53,785,815
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 276 bp overlap
BRD4 1 dataset
ChIP HCT-15 GSE73319.BRD4.HCT-15 276 bp overlap
CDX2 1 dataset
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 235 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 97 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 276 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 276 bp overlap
ChIP DE DE-FOXA2-2 276 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
GATA2 3 datasets
ChIP WA09 GSE105081.GATA2.WA09 219 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 188 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 166 bp overlap
GATA3 1 dataset
ChIP WA09 GSE105081.GATA3.WA09 187 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 276 bp overlap
ChIP DE DE-GATA4-2 276 bp overlap
ChIP foregut GSE117136.GATA4.foregut 276 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 276 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 276 bp overlap
ChIP AGS GSE51936.GATA6.AGS 248 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 244 bp overlap
ChIP DE DE-GATA6-1 276 bp overlap
ChIP DE DE-GATA6-2 276 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 276 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 276 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 276 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 276 bp overlap
ChIP foregut GSE117136.GATA6.foregut 276 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 276 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 276 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 243 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 125 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 276 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 276 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 276 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 276 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 152 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 144 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 215 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 276 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 276 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 276 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 276 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 276 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 276 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 276 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 276 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 276 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 233 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 189 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 205 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 265 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 175 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 261 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 257 bp overlap