chr20 : 2,509,937 – 2,510,112
175 bp 92 TFs 2 linked genes
This 175 bp open chromatin element is linked to ZNF343 and ENSG00000256566 and is bound by 92 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF343 805 bp At TSS Proximity
ENSG00000256566 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,504,937 – 2,515,112
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 175 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 121 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 142 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 160 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 175 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 122 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 140 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 175 bp overlap
ChIP K562 ENCFF938UXQ 175 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 175 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 89 bp overlap
ATF3 5 datasets
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 173 bp overlap
ChIP HepG2 ENCFF832LTU 175 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 175 bp overlap
ChIP K562 ENCFF604FPV 175 bp overlap
ChIP K562 ENCFF921JQW 175 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 175 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 175 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 175 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 175 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 175 bp overlap
ChIP K562 ENCFF963TXY 175 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 175 bp overlap
ChIP K562 ENCFF673OEZ 175 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 135 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 152 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 175 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 175 bp overlap
CTCF 1 dataset
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 114 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 175 bp overlap
ChIP K562 ENCFF739JDE 175 bp overlap
ChIP K562 ENCFF775HUO 175 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 175 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 129 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 175 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 168 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 80 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 107 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 175 bp overlap
ChIP K562 ENCFF455MKD 175 bp overlap
FOSL2 3 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 153 bp overlap
ChIP HepG2 ENCFF548CXY 175 bp overlap
ChIP HepG2 ENCFF796NIA 175 bp overlap
FOXA1 6 datasets
ChIP HepG2 ENCFF207NVJ 173 bp overlap
ChIP HepG2 ENCFF361KNY 72 bp overlap
ChIP HepG2 ENCFF740VZW 166 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 116 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 175 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 89 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 156 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 110 bp overlap
ChIP DE DE-FOXA2-1 175 bp overlap
ChIP DE DE-FOXA2-2 175 bp overlap
ChIP HepG2 ENCFF533COJ 130 bp overlap
ChIP HepG2 ENCFF570ABM 175 bp overlap
ChIP HepG2 ENCFF894AYY 136 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 175 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 157 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 175 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 175 bp overlap
FOXL2 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 175 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 175 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 175 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 125 bp overlap
GATA1 7 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 175 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 137 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 175 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 175 bp overlap
ChIP K562 ENCFF094CMK 175 bp overlap
ChIP erythroblast ENCFF867JAR 131 bp overlap
GATA2 5 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 143 bp overlap
ChIP HepG2 ENCFF905PYM 175 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 156 bp overlap
ChIP K562 ENCFF544PCK 175 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 147 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 166 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 112 bp overlap
ChIP DE DE-GATA4-1 175 bp overlap
ChIP DE DE-GATA4-2 175 bp overlap
ChIP foregut GSE117136.GATA4.foregut 175 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 175 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 175 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 155 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 175 bp overlap
ChIP DE DE-GATA6-1 175 bp overlap
ChIP DE DE-GATA6-2 175 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 175 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 175 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 175 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 175 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 175 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 175 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 175 bp overlap
ChIP foregut GSE117136.GATA6.foregut 175 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 175 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 175 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 175 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 175 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 175 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 144 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 175 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR174GOO.HMGXB4.Hep-G2 118 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 57 bp overlap
JUN 10 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 175 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 175 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 175 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 175 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 175 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 175 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 175 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 175 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 175 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 159 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 175 bp overlap
JUND 6 datasets
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 147 bp overlap
ChIP HepG2 ENCFF172HFZ 175 bp overlap
ChIP HepG2 ENCFF869OPW 175 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 171 bp overlap
ChIP K562 ENCFF830LVJ 175 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 122 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 113 bp overlap
MIER3 1 dataset
ChIP HepG2 ENCFF032KTL 175 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 113 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 157 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 126 bp overlap
ChIP H1 ENCFF747ZPQ 148 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 175 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 175 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 161 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 175 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 175 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 175 bp overlap
ChIP hESC GSE20650.NANOG.hESC 159 bp overlap
ChIP hESC GSE18292.NANOG.hESC 175 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 175 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 175 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 175 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 124 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 147 bp overlap
NR2C2 1 dataset
ChIP Hep-G2 ENCSR559ZKI.NR2C2.Hep-G2 159 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 175 bp overlap
NR5A1 1 dataset
ChIP HepG2 ENCFF970YZO 175 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 174 bp overlap
PML 1 dataset
ChIP GM12878 ENCFF160JQZ 55 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 175 bp overlap
ChIP H1 ENCFF833NJP 175 bp overlap
POU5F1 12 datasets
ChIP GM23338 ENCFF333SNB 175 bp overlap
ChIP H1 ENCFF698ZAP 129 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 175 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 175 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 122 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 175 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 175 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 147 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 175 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 175 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 175 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 120 bp overlap
PRDM14 3 datasets
ChIP hESC GSE138674.PRDM14.hESC 175 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 175 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 175 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 175 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 175 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 175 bp overlap
RORA 1 dataset
ChIP HepG2 ENCFF086FZV 175 bp overlap
SATB2 1 dataset
ChIP HepG2 ENCFF749IAK 175 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 98 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 98 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 175 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 175 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 175 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 175 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 175 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 175 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 175 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 94 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 161 bp overlap
SMARCA4 5 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 175 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 175 bp overlap
ChIP K562 ENCFF506JCB 175 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 175 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 132 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 175 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 175 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 152 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 161 bp overlap
SMARCC2 2 datasets
ChIP Hep-G2 ENCSR887LYD.SMARCC2.Hep-G2 144 bp overlap
ChIP HepG2 ENCFF245YDW 138 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 175 bp overlap
SMYD3 1 dataset
ChIP HepG2 ENCFF612TNJ 69 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 141 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 175 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 175 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 166 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 175 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 122 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 175 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 175 bp overlap
TAL1 10 datasets
ChIP K-562 GSE107726.TAL1.K-562 175 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 175 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 175 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 152 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 134 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 159 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 139 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 91 bp overlap
ChIP K562 ENCFF620GMX 175 bp overlap
ChIP K562 ENCFF661CCK 175 bp overlap
TCF12 4 datasets
ChIP H1 ENCFF203EBH 141 bp overlap
ChIP K-562 ENCSR744WOO.TCF12.K-562 158 bp overlap
ChIP K562 ENCFF931DJY 175 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 175 bp overlap
TCF3 3 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 175 bp overlap
ChIP K562 ENCFF319QZT 175 bp overlap
ChIP NPC GSE154479.TCF3.NPC 175 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 116 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 175 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 155 bp overlap
ChIP K562 ENCFF673NIK 175 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 163 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 140 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 130 bp overlap
ZEB1 1 dataset
ChIP Hep-G2 ENCSR000BVN.ZEB1.Hep-G2 139 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 175 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 175 bp overlap
ChIP K562 ENCFF795CMH 169 bp overlap
ChIP K562 ENCFF975RXS 175 bp overlap
ZFP82 1 dataset
ChIP HepG2 ENCFF665HBX 175 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 129 bp overlap
ZNF264 1 dataset
ChIP HepG2 ENCFF453WJV 175 bp overlap
ZNF331 1 dataset
ChIP HepG2 ENCFF842SZN 175 bp overlap
ZNF7 1 dataset
ChIP HepG2 ENCFF983XQI 157 bp overlap
ZNF850 2 datasets
ChIP HepG2 ENCFF671RTH 175 bp overlap
ChIP HepG2 ENCFF671RTH 175 bp overlap
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