chr20 : 2,510,228 – 2,510,373
145 bp 28 TFs 2 linked genes
This 145 bp open chromatin element is linked to ZNF343 and ENSG00000256566 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF343 1.1 kb Proximal Proximity
ENSG00000256566 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:2,505,228 – 2,515,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K562 ENCFF921JQW 128 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 145 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 121 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF739JDE 66 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 136 bp overlap
EZH2 1 dataset
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 145 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 63 bp overlap
ChIP K562 ENCFF455MKD 145 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 76 bp overlap
ChIP DE DE-FOXA2-1 145 bp overlap
ChIP DE DE-FOXA2-2 145 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 145 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 100 bp overlap
GATA2 1 dataset
ChIP HepG2 ENCFF905PYM 145 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 119 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 145 bp overlap
ChIP DE DE-GATA4-2 145 bp overlap
ChIP foregut GSE117136.GATA4.foregut 145 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 145 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 145 bp overlap
GATA6 13 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 123 bp overlap
ChIP DE DE-GATA6-1 145 bp overlap
ChIP DE DE-GATA6-2 145 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 145 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 145 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 145 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 145 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 145 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 145 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 145 bp overlap
ChIP foregut GSE117136.GATA6.foregut 145 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 145 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 84 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 86 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 56 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 65 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 59 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 70 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 53 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 145 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 145 bp overlap
SATB2 1 dataset
ChIP HepG2 ENCFF749IAK 130 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 145 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 145 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 145 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 145 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 145 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 145 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 145 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 62 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 109 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 145 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 145 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 66 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 134 bp overlap
ZNF850 1 dataset
ChIP HepG2 ENCFF671RTH 145 bp overlap