chr20 : 12,317,817 – 12,318,313
496 bp 20 TFs 2 linked genes
This 496 bp open chromatin element is linked to ENSG00000235292 and ENSG00000230437 and is bound by 20 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000235292 at TSS At TSS Proximity
ENSG00000230437 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:12,312,817 – 12,323,313
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 237 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 405 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 255 bp overlap
FOXA1 3 datasets
ChIP LS180 GSE140533.FOXA1.LS180 181 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 160 bp overlap
ChIP liver ERP002306.FOXA1.liver 109 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 496 bp overlap
ChIP DE DE-FOXA2-2 496 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 134 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 496 bp overlap
ChIP DE DE-GATA4-2 496 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 196 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 311 bp overlap
ChIP DE DE-GATA6-1 109 bp overlap
ChIP DE DE-GATA6-2 496 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 270 bp overlap
JUND 1 dataset
ChIP liver ENCSR837GTK.JUND.liver 160 bp overlap
MAX 1 dataset
ChIP liver ENCSR521IID.MAX.liver 162 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 227 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 126 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 172 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 161 bp overlap
REST 1 dataset
ChIP liver ENCSR867WPH.REST.liver 167 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 282 bp overlap
SETDB1 1 dataset
ChIP WN8532 GSE36579.SETDB1.WN8532 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 273 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 309 bp overlap