chr20 : 44,522,935 – 44,523,165
230 bp 24 TFs 2 linked genes
This 230 bp open chromatin element is linked to SERINC3 and PKIG and is bound by 24 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SERINC3 881 bp At TSS Proximity
PKIG 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:44,517,935 – 44,528,165
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 128 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 230 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 125 bp overlap
EZH2 1 dataset
ChIP OCI-Ly7 GSE45982.EZH2.OCI-Ly7 160 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 230 bp overlap
ChIP DE DE-FOXA2-2 230 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 230 bp overlap
ChIP DE DE-GATA4-2 230 bp overlap
ChIP foregut GSE117136.GATA4.foregut 230 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 230 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 175 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 118 bp overlap
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 230 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 230 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 230 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 230 bp overlap
ChIP foregut GSE117136.GATA6.foregut 230 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 230 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 230 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 230 bp overlap
HOXA7 1 dataset
ChIP A549 ENCFF746ZBJ 51 bp overlap
HOXA9 1 dataset
ChIP SEM GSE38339.HOXA9.SEM 128 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 228 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 230 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 230 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 123 bp overlap
NAIF1 1 dataset
ChIP HepG2 ENCFF291NIS 180 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 70 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 189 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 230 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 230 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 230 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 230 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 230 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 230 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 230 bp overlap
SNAI1 1 dataset
ChIP HepG2 ENCFF017SIW 183 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 230 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 199 bp overlap
TOE1 1 dataset
ChIP HepG2 ENCFF776YJH 167 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
ZC3H8 1 dataset
ChIP HepG2 ENCFF862NOM 230 bp overlap
ZNF778 1 dataset
ChIP HepG2 ENCFF967DPC 224 bp overlap