chr20 : 45,854,794 – 45,855,232
438 bp 28 TFs 2 linked genes
This 438 bp open chromatin element is linked to ACOT8 and ZSWIM3 and is bound by 28 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ACOT8 2.2 kb Proximal Proximity
ZSWIM3 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:45,849,794 – 45,860,232
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 109 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 392 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 235 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 182 bp overlap
ESR1 1 dataset
ChIP T-47D GSE148277.ESR1.T-47D 171 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 208 bp overlap
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 227 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 58 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 211 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 159 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 374 bp overlap
ChIP DE DE-GATA4-2 381 bp overlap
ChIP foregut GSE117136.GATA4.foregut 336 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 280 bp overlap
ChIP DE DE-GATA6-2 396 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 156 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 154 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 215 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 409 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 183 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 306 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 285 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 96 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 261 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 184 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 106 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 174 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 364 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 224 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 438 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 228 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 183 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 187 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 233 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 308 bp overlap