chr20 : 56,632,340 – 56,632,526
186 bp 23 TFs 2 linked genes
This 186 bp open chromatin element is linked to TFAP2C and ENSG00000289199 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TFAP2C 3.0 kb Proximal Proximity
ENSG00000289199 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:56,627,340 – 56,637,526
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 186 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 92 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCFF937PTG 186 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 182 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 186 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 186 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF305BNP 141 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
EZH2 9 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 186 bp overlap
ChIP A673 ENCFF790MVL 136 bp overlap
ChIP A673 ENCFF790MVL 186 bp overlap
ChIP A673 ENCFF955JRZ 161 bp overlap
ChIP A673 ENCFF955JRZ 186 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 160 bp overlap
ChIP SK-N-MC ENCFF674XUJ 186 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 186 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 175 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 186 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 186 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 163 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 186 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 186 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 186 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 186 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 186 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 186 bp overlap
MEN1 1 dataset
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 186 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 116 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 186 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 186 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 186 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 130 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 186 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 54 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 186 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 186 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 61 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 185 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 72 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 149 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 186 bp overlap
ZBTB40 1 dataset
ChIP MCF-7 ENCFF044DWL 186 bp overlap