chr20 : 56,632,796 – 56,633,063
267 bp 12 TFs 2 linked genes
This 267 bp open chromatin element is linked to TFAP2C and ENSG00000289199 and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TFAP2C 3.5 kb Proximal Proximity
ENSG00000289199 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:56,627,796 – 56,638,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 267 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 267 bp overlap
ChIP DE DE-GATA4-2 267 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 267 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 267 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 224 bp overlap
MEN1 1 dataset
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 105 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF164XWP 77 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 267 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 267 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 267 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 267 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 161 bp overlap