chr21 : 32,142,536 – 32,143,080
544 bp 39 TFs 2 linked genes
This 544 bp open chromatin element is linked to MIS18A and URB1 and is bound by 39 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MIS18A 136.2 kb Distal Multiome
URB1 250.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:32,137,536 – 32,148,080
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
E2F6 1 dataset
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 497 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 178 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 96 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 544 bp overlap
ChIP DE DE-FOXA2-2 544 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 268 bp overlap
ChIP SK-N-SH ENCFF764OZD 385 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 195 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 300 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 544 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 273 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 503 bp overlap
ChIP DE DE-GATA6-2 544 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 279 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 517 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 368 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 336 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 138 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 355 bp overlap
HNF1A 1 dataset
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 346 bp overlap
Ikzf3 1 dataset
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 226 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 483 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 420 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 197 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 153 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 512 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 395 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 381 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 318 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 418 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 338 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 366 bp overlap
TEAD2 1 dataset
Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap
TEAD4 1 dataset
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 383 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 147 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 147 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 91 bp overlap
ZSCAN31 1 dataset
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap