chr21 : 33,652,026 – 33,652,412
386 bp 55 TFs 2 linked genes
This 386 bp open chromatin element is linked to ITSN1 and CRYZL1 and is bound by 55 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ITSN1 9.5 kb Proximal Proximity
CRYZL1 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:33,647,026 – 33,657,412
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 131 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 253 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 172 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 299 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 238 bp overlap
CTCF 7 datasets
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 174 bp overlap
ChIP endodermal cell ENCFF471YCZ 353 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 386 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 318 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 267 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 341 bp overlap
ChIP right atrium auricular region ENCFF696NTN 357 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 176 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 172 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 170 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ESR1 11 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 139 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 127 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 52 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 244 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 323 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 260 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 244 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 80 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 299 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 296 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 272 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 178 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 385 bp overlap
FOXA1 3 datasets
ChIP MCF-7 GSE59530.FOXA1.MCF-7 146 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 146 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 139 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 372 bp overlap
ChIP DE DE-FOXA2-2 386 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 208 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 273 bp overlap
ChIP DE DE-GATA4-2 386 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 191 bp overlap
ChIP foregut GSE117136.GATA4.foregut 80 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 263 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 176 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 126 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 175 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 159 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 201 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 209 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 77 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 299 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 205 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 386 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCFF783SBT 68 bp overlap
ChIP HepG2 ENCFF452YUT 66 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 138 bp overlap
ChIP HepG2 ENCFF767LDG 68 bp overlap
ChIP IMR-90 ENCFF336DHZ 70 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 156 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 116 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 159 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 236 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 254 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 252 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 149 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 221 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 144 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 178 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 140 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 179 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 168 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 217 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 210 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 325 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 343 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 114 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 98 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 238 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 113 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 268 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 249 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 164 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 226 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 287 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 83 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 146 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 199 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 176 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 386 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 327 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 310 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 255 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 205 bp overlap
ZNF134 1 dataset
ChIP HEK293 GSE76494.ZNF134.HEK293 202 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 181 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 269 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 341 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 235 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 140 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 285 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 147 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 169 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 357 bp overlap