chr22 : 26,837,981 – 26,838,718
737 bp 128 TFs 3 linked genes
This 737 bp open chromatin element is linked to LINC01422, MIATNB, and TPST2 and is bound by 128 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01422 20.2 kb Distal Multiome
MIATNB 165.6 kb Distal Multiome
TPST2 248.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:26,832,981 – 26,843,718
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
128 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 439 bp overlap
ASCL1 6 datasets
Motif DE_24h DE_24h-ASCL1_MA1631.2 9 bp overlap
Motif DE_36h DE_36h-ASCL1_MA1100.3 8 bp overlap
Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 157 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 249 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 162 bp overlap
ATF2 3 datasets
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 211 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 293 bp overlap
ChIP HepG2 ENCFF955VER 189 bp overlap
Ascl2 1 dataset
Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 230 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 143 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 187 bp overlap
BRD4 2 datasets
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 138 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 395 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 186 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 210 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 153 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 288 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 288 bp overlap
CTCF 17 datasets
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 223 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 152 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 200 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 158 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 433 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 261 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 154 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 167 bp overlap
ChIP body of pancreas ENCFF881RGF 281 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 142 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 297 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 290 bp overlap
Dux 1 dataset
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
EHF 1 dataset
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_48h DE_48h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_48h DE_48h-ELF4_MA0641.1 12 bp overlap
ELK4 1 dataset
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 412 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.EP300.pulmonary-artery_endothelial-cell_siPFKFB3 97 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 328 bp overlap
ETV1 1 dataset
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
Motif DE_48h DE_48h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_48h DE_48h-ETV7_MA1708.2 9 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 234 bp overlap
Elf5 1 dataset
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FIGLA 3 datasets
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 142 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 622 bp overlap
ChIP DE DE-FOXA2-2 449 bp overlap
GABPA 1 dataset
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA1 2 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 720 bp overlap
ChIP DE DE-GATA4-2 737 bp overlap
ChIP foregut GSE117136.GATA4.foregut 299 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 662 bp overlap
ChIP DE DE-GATA6-2 711 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 737 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 725 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 737 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 706 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 409 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 737 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 708 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 215 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
IKZF1 2 datasets
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 737 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 562 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 737 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 737 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 468 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 332 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 737 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 271 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 261 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 126 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 495 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 91 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 239 bp overlap
ChIP H1 ENCFF854XWE 194 bp overlap
MEF2A 1 dataset
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_36h DE_36h-MEF2C_MA0497.2 11 bp overlap
MEF2D 2 datasets
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 307 bp overlap
MYOG 1 dataset
Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 152 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 152 bp overlap
ChIP K562 ENCFF047YKA 238 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 385 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 151 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 139 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 198 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 575 bp overlap
PLAG1 1 dataset
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 462 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
PTBP1 1 dataset
ChIP K-562 GSE120104.PTBP1.K-562 165 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 242 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 340 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 202 bp overlap
ChIP K562 ENCFF248CGR 182 bp overlap
ChIP K562 ENCFF957ORK 179 bp overlap
RBPJ 2 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 117 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 256 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 728 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 737 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 737 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 737 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 737 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 723 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 737 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 737 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 192 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 226 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 179 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 285 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 737 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 243 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 219 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 412 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 198 bp overlap
SNAI1 1 dataset
Motif DE_24h DE_24h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_24h DE_24h-SNAI2_MA0745.3 8 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 215 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 471 bp overlap
SPIB 1 dataset
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 294 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 262 bp overlap
TAL1 2 datasets
ChIP K-562 GSE107726.TAL1.K-562 261 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
TCF12 2 datasets
Motif DE_24h DE_24h-TCF12_MA1648.2 7 bp overlap
ChIP K-562 ENCSR744WOO.TCF12.K-562 190 bp overlap
TCF3 1 dataset
Motif DE_24h DE_24h-TCF3_MA0522.4 7 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
XRCC5 4 datasets
ChIP K-562 GSE120104.XRCC5.K-562 270 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 258 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 69 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 69 bp overlap
ZBTB11 1 dataset
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 3 datasets
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 121 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 222 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 132 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 164 bp overlap
ChIP K562 ENCFF361LXT 208 bp overlap
ZNF140 1 dataset
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
ZNF175 1 dataset
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 258 bp overlap
ZNF549 1 dataset
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF490FFQ 179 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 82 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap