chr22 : 35,134,690 – 35,135,283
593 bp 87 TFs 5 linked genes
This 593 bp open chromatin element is linked to 5 target genes and is bound by 87 transcription factors.
Linked Genes
5 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HMGXB4 122.6 kb Distal Multiome
LINC02885 132.0 kb Distal Multiome
TOM1 165.0 kb Distal Multiome
MCM5 265.3 kb Distal Multiome
LARGE1 1212.0 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:35,129,690 – 35,140,283
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 311 bp overlap
ChIP K562 ENCFF938UXQ 262 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 338 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 354 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 209 bp overlap
BRD4 3 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 447 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 110 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 236 bp overlap
CBFA2T2 3 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 239 bp overlap
ChIP K562 ENCFF963TXY 314 bp overlap
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 169 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 302 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 220 bp overlap
ChIP K562 ENCFF673OEZ 239 bp overlap
CDX2 6 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 236 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 199 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 227 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 212 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 323 bp overlap
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 218 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 146 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 125 bp overlap
ChIP K562 ENCFF180STA 257 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 281 bp overlap
CTCF 6 datasets
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 108 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 257 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 181 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 304 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 267 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 565 bp overlap
CTNNB1 2 datasets
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 121 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 254 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 249 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 287 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 195 bp overlap
ChIP K562 ENCFF226VMS 266 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 312 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 387 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 316 bp overlap
ChIP hepatocyte ENCFF118DKH 270 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 353 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 287 bp overlap
ChIP DE DE-FOXA2-2 283 bp overlap
GATA1 7 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 169 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 152 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 105 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 325 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 164 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 224 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 208 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 243 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 155 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 593 bp overlap
ChIP DE DE-GATA4-2 442 bp overlap
ChIP ESO-26 GSE132813.GATA4.ESO-26 416 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 214 bp overlap
ChIP foregut GSE117136.GATA4.foregut 363 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 417 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 478 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 140 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 127 bp overlap
ChIP DE DE-GATA6-1 425 bp overlap
ChIP DE DE-GATA6-2 412 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 451 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 518 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 456 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 430 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 321 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 593 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 494 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 142 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 221 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 408 bp overlap
ChIP foregut GSE117136.GATA6.foregut 354 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 348 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 480 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 440 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 379 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 284 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 181 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 150 bp overlap
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 375 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 117 bp overlap
ChIP GM12878 ENCFF824TGK 170 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 388 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 338 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 452 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 230 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 250 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 307 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 328 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 215 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 118 bp overlap
MBD2 1 dataset
ChIP K-562 ENCSR221GAN.MBD2.K-562 120 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 483 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 119 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 113 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 336 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 440 bp overlap
ChIP K-562 ENCSR000EZV.MYC.K-562 131 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 188 bp overlap
NANOG 2 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 90 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 72 bp overlap
NCOR1 5 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 273 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 282 bp overlap
ChIP K562 ENCFF788MPU 363 bp overlap
ChIP K562 ENCFF866HRM 338 bp overlap
ChIP LS180 GSE39277.NCOR1.LS180 182 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 210 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 575 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 200 bp overlap
ChIP K562 ENCFF674RQA 321 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 205 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 180 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 345 bp overlap
POLR2A 4 datasets
ChIP Peyer's patch ENCFF767HVN 373 bp overlap
ChIP Peyer's patch ENCFF990IYL 405 bp overlap
ChIP transverse colon ENCFF607LKE 300 bp overlap
ChIP transverse colon ENCFF610RWV 242 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 168 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 219 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 391 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 309 bp overlap
ChIP K562 ENCFF740YLK 110 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 593 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 593 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 373 bp overlap
REST 2 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 76 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 440 bp overlap
RUNX1 1 dataset
ChIP K-562 ENCSR588AKU.RUNX1.K-562 189 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 148 bp overlap
RXR 3 datasets
ChIP LS180 GSE31939.RXR.LS180 201 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 491 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 134 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 361 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 453 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 365 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 345 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 365 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 431 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 540 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 225 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 220 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 281 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 473 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 213 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 130 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 269 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 258 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 266 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 245 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 189 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 158 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 220 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 211 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 207 bp overlap
ChIP K562 ENCFF620GMX 344 bp overlap
ChIP K562 ENCFF661CCK 260 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 148 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 246 bp overlap
ChIP K562 ENCFF931DJY 315 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 226 bp overlap
ChIP K562 ENCFF319QZT 321 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 100 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 96 bp overlap
TCF7 1 dataset
ChIP K-562 ENCSR863KUB.TCF7.K-562 111 bp overlap
TERF2 1 dataset
ChIP smooth-muscle-cell_iciHHV6 GSE121985.TERF2.smooth-muscle-cell_iciHHV6 219 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 237 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 149 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 136 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 254 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 117 bp overlap
ZNF341 5 datasets
ChIP HEK293 ENCFF944VMC 150 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 103 bp overlap
ChIP HIES_EBV-B_ZNF341_isoform1 GSE113194.ZNF341.HIES_EBV-B_ZNF341_isoform1 50 bp overlap
ChIP HIES_EBV-B_ZNF341_isoform2 GSE113194.ZNF341.HIES_EBV-B_ZNF341_isoform2 142 bp overlap
ChIP LBCL_EBV-transformed GSE107719.ZNF341.LBCL_EBV-transformed 66 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 89 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 301 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 67 bp overlap