chrX : 13,741,367 – 13,741,894
527 bp 14 TFs 2 linked genes
This 527 bp open chromatin element is linked to OFD1 and TRAPPC2 and is bound by 14 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
OFD1 6.6 kb Proximal Proximity
TRAPPC2 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:13,736,367 – 13,746,894
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 104 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 60 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 208 bp overlap
ChIP BLaER1 ENCFF335XTP 158 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 287 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 164 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 501 bp overlap
ChIP DE DE-FOXA2-2 513 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 204 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 480 bp overlap
ChIP DE DE-GATA4-2 522 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 506 bp overlap
ChIP DE DE-GATA6-2 527 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 433 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 319 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 168 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 356 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 424 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 316 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 313 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 489 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 181 bp overlap