chrX : 15,665,076 – 15,665,309
233 bp 20 TFs 2 linked genes
This 233 bp open chromatin element is linked to CA5BP1 and CLTRN and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CA5BP1 9.7 kb Proximal Proximity
CLTRN 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:15,660,076 – 15,670,309
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 93 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 169 bp overlap
ChIP BLaER1 ENCFF262VBH 194 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 73 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 195 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 233 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 142 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 113 bp overlap
ChIP DE DE-FOXA2-1 233 bp overlap
ChIP DE DE-FOXA2-2 233 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 233 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 199 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 233 bp overlap
ChIP DE DE-GATA6-2 233 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 185 bp overlap
ChIP foregut GSE117136.GATA6.foregut 233 bp overlap
HIF1A 2 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 99 bp overlap
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 113 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 179 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 112 bp overlap
MAX 1 dataset
ChIP A549 ENCFF310XGQ 233 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 110 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 105 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 233 bp overlap
SMAD3 2 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 115 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 176 bp overlap
STAT3 3 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 103 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 75 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 76 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 183 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 148 bp overlap
YY1 2 datasets
ChIP liver ENCFF515BWJ 57 bp overlap
ChIP liver ENCFF515BWJ 233 bp overlap
ZNF652 1 dataset
ChIP HepG2 ENCFF331VPZ 233 bp overlap