chrX : 18,763,106 – 18,763,616
510 bp 23 TFs 2 linked genes
This 510 bp open chromatin element is linked to PHKA2 and ENSG00000286724 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PHKA2 220.8 kb Distal Multiome
ENSG00000286724 221.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:18,758,106 – 18,768,616
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
DMRTA1 1 dataset
Motif DE_72h DE_72h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_72h DE_72h-DMRTC2_MA1479.2 11 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 200 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 510 bp overlap
ChIP DE DE-FOXA2-2 451 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 480 bp overlap
ChIP DE DE-GATA4-2 498 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 248 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 510 bp overlap
ChIP DE DE-GATA6-2 509 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 417 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 504 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 446 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 510 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 269 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 318 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 451 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 315 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 510 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 483 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 272 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 510 bp overlap
Smad4 1 dataset
Motif DE_72h DE_72h-Smad4_MA1153.2 7 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 100 bp overlap
ZNF136 1 dataset
Motif DE_72h DE_72h-ZNF136_MA1588.1 15 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
Zfx 1 dataset
Motif DE_72h DE_72h-Zfx_MA0146.3 10 bp overlap