chrX : 47,197,196 – 47,197,435
239 bp 26 TFs 2 linked genes
This 239 bp open chromatin element is linked to UBA1 and INE1 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
UBA1 6.3 kb Proximal Proximity
INE1 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:47,192,196 – 47,202,435
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 58 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 153 bp overlap
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 92 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 222 bp overlap
ChIP K562 ENCFF673OEZ 239 bp overlap
CTCF 1 dataset
ChIP GM13976 ENCFF896BYT 157 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 239 bp overlap
ChIP DE DE-FOXA2-2 239 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 126 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 144 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
ChIP erythroblast ENCFF867JAR 239 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 239 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 239 bp overlap
ChIP DE DE-GATA4-2 239 bp overlap
ChIP foregut GSE117136.GATA4.foregut 239 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 239 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 239 bp overlap
ChIP DE DE-GATA6-2 239 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 239 bp overlap
ChIP foregut GSE117136.GATA6.foregut 239 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 239 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 239 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 164 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR908CMW.KDM1A.K-562 164 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 159 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 123 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 95 bp overlap
ChIP K562 ENCFF399UNK 156 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 156 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 233 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 182 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 142 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 61 bp overlap
PKNOX1 4 datasets
ChIP GM12878 ENCFF589FCY 239 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 239 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 232 bp overlap
ChIP K562 ENCFF236IUS 171 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF263VRI 208 bp overlap
ChIP GM12878 ENCFF263VRI 239 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 239 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 239 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 132 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 135 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 144 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 175 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 184 bp overlap
ZNF263 1 dataset
ChIP HepG2 ENCFF626SSV 112 bp overlap