chrX : 48,921,656 – 48,922,006
350 bp 22 TFs 2 linked genes
This 350 bp open chromatin element is linked to PIM2 and SLC35A2 and is bound by 22 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PIM2 2.6 kb Proximal Proximity
SLC35A2 10.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:48,916,656 – 48,927,006
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 322 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 180 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 275 bp overlap
FOSL1 3 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 79 bp overlap
ChIP K562 ENCFF455MKD 123 bp overlap
ChIP K562 ENCFF455MKD 344 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 350 bp overlap
ChIP DE DE-FOXA2-2 350 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 350 bp overlap
ChIP DE DE-GATA4-2 350 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 232 bp overlap
ChIP DE DE-GATA6-2 350 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 307 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 344 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 350 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF348IBL 330 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 52 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 135 bp overlap
POLR2A 3 datasets
ChIP HeLa-S3 ENCFF224LWS 102 bp overlap
ChIP K562 ENCFF514URW 157 bp overlap
ChIP K562 ENCFF514URW 313 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 105 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 155 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 218 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 350 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 350 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 350 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 164 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 350 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 350 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 237 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 214 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 98 bp overlap