chr2 : 30,152,494 – 30,152,682
188 bp 17 TFs 2 linked genes
This 188 bp open chromatin element is linked to YPEL5 and ENSG00000233862 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
YPEL5 5.6 kb Proximal Proximity
ENSG00000233862 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:30,147,494 – 30,157,682
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 188 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 188 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 188 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 188 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 188 bp overlap
ChIP DE DE-FOXA2-2 188 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 188 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 188 bp overlap
ChIP SK-N-SH ENCFF764OZD 188 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 188 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 188 bp overlap
GATA3 6 datasets
ChIP Kelly GSE65664.GATA3.Kelly 152 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 148 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 186 bp overlap
ChIP SH-SY5Y ENCFF475HYF 188 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 188 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 142 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 188 bp overlap
ChIP DE DE-GATA4-2 188 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 188 bp overlap
ChIP foregut GSE117136.GATA4.foregut 188 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 181 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 188 bp overlap
ChIP DE DE-GATA6-2 188 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 188 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 188 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 188 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 188 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 188 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 188 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 188 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 187 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 188 bp overlap
ChIP HEK293 ENCFF283AJL 182 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 175 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 188 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 188 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 188 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 160 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 188 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 188 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 188 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 137 bp overlap