chr2 : 44,430,133 – 44,430,674
541 bp 78 TFs 3 linked genes
This 541 bp open chromatin element is linked to CAMKMT, PREPL, and PPM1B and is bound by 78 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CAMKMT 68.5 kb Distal Multiome
PREPL 69.0 kb Distal Multiome
PPM1B 261.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:44,425,133 – 44,435,674
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 352 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 285 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 189 bp overlap
CHD4 1 dataset
ChIP macrophage GSE136216.CHD4.macrophage 210 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 368 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 262 bp overlap
EOMES 2 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 518 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 130 bp overlap
ChIP hESC GSE17917.EP300.hESC 386 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 197 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 329 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 217 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 541 bp overlap
ChIP DE DE-FOXA2-2 541 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 263 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 293 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 529 bp overlap
ChIP DE DE-GATA4-2 532 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 510 bp overlap
ChIP DE DE-GATA6-2 541 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 456 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 503 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 410 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 401 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 541 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 452 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 403 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 285 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 486 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 305 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 500 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 242 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 357 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 541 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 532 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 301 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 541 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 541 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 516 bp overlap
ChIP hESC GSE20650.NANOG.hESC 306 bp overlap
ChIP hESC GSE18292.NANOG.hESC 320 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 225 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 308 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 397 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 264 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 137 bp overlap
POU1F1 1 dataset
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_48h DE_48h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
POU5F1 11 datasets
Motif DE_48h DE_48h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 398 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 479 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 384 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 245 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 200 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 361 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 413 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 232 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 318 bp overlap
Prdm5 1 dataset
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 252 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 287 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 106 bp overlap
Rfx6 1 dataset
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 263 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 260 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 451 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 474 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 400 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 377 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 440 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 269 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 265 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 161 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 172 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 541 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 316 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 541 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 312 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 252 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 502 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 412 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 499 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 344 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 394 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 477 bp overlap
SOX18 1 dataset
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SOX2 3 datasets
ChIP H9 GSE46837.SOX2.H9 156 bp overlap
ChIP hESC GSE18292.SOX2.hESC 232 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 367 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 327 bp overlap
SOX9 1 dataset
Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 276 bp overlap
SRY 1 dataset
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 464 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 406 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 230 bp overlap
TBR1 1 dataset
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX19 1 dataset
Motif DE_48h DE_48h-TBX19_MA0804.2 17 bp overlap
TBX2 1 dataset
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 290 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 390 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 319 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 395 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 315 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 479 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 158 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 403 bp overlap
ZNF547 2 datasets
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap
Motif DE_48h DE_48h-ZNF547_MA2334.1 13 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap