chr2 : 46,551,009 – 46,551,446
437 bp 51 TFs 2 linked genes
This 437 bp open chromatin element is linked to RHOQ and ATP6V1E2 and is bound by 51 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RHOQ 8.3 kb Proximal Proximity
ATP6V1E2 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:46,546,009 – 46,556,446
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 155 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 411 bp overlap
ChIP K562 ENCFF938UXQ 423 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 97 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 280 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 339 bp overlap
ChIP K562 ENCFF673OEZ 184 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 189 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 143 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 408 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 344 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 221 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 187 bp overlap
ESR1 8 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 175 bp overlap
ChIP MCF-7_IL1b-ICI GSE67295.ESR1.MCF-7_IL1b-ICI 198 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 331 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 302 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 175 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 293 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 276 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 263 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 76 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 306 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 138 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 327 bp overlap
GATA1 6 datasets
ChIP K-562 GSE107726.GATA1.K-562 260 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 123 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 73 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 214 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 281 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA2 10 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 336 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 173 bp overlap
ChIP K562 ENCFF830LLA 437 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 374 bp overlap
ChIP SK-N-SH ENCFF764OZD 184 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 189 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 250 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 150 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 150 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 292 bp overlap
GATA3 4 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 277 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 263 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 231 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 139 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 187 bp overlap
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 437 bp overlap
ChIP foregut GSE117136.GATA4.foregut 318 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 437 bp overlap
ChIP DE DE-GATA6-2 423 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 406 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 242 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 437 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 437 bp overlap
ChIP foregut GSE117136.GATA6.foregut 355 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 272 bp overlap
GRHL2 1 dataset
ChIP MCF-7 GSE109820.GRHL2.MCF-7 181 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 256 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 108 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 431 bp overlap
ChIP K562 ENCFF348IBL 437 bp overlap
ChIP K562 ENCFF348IBL 298 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 185 bp overlap
MED1 1 dataset
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 82 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 154 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 126 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 226 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 310 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF521FXC 434 bp overlap
RELA 1 dataset
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 186 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 285 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 318 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 165 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
STAT1_pS727 2 datasets
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 264 bp overlap
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 69 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 185 bp overlap
TAL1 4 datasets
ChIP K-562 GSE107726.TAL1.K-562 406 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 248 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 240 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 179 bp overlap
TBX5 4 datasets
ChIP G296S GSE85628.TBX5.G296S 217 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 217 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 106 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 118 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 216 bp overlap
ChIP K562 ENCFF319QZT 338 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 131 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 230 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 390 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 201 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 235 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 91 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 137 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 239 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 227 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 253 bp overlap