chr2 : 119,700,871 – 119,701,304
433 bp 93 TFs 4 linked genes
This 433 bp open chromatin element is linked to 4 target genes and is bound by 93 transcription factors.
Linked Genes
4 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TMEM177 22.0 kb Distal Multiome
PTPN4 58.8 kb Distal Multiome
TMEM37 269.3 kb Distal Multiome
EPB41L5 311.9 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:119,695,871 – 119,706,304
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
None 2 datasets
ChIP HepG2 ENCFF731CFD 347 bp overlap
ChIP HepG2 ENCFF731CFD 433 bp overlap
AR 1 dataset
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 189 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 357 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 433 bp overlap
ChIP H1 ENCFF399KAM 373 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 433 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 170 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 433 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 433 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 433 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 225 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 368 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 175 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 215 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 258 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 223 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 341 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 156 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 337 bp overlap
ESR1 20 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 251 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 233 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 316 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 320 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 218 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 260 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 377 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 346 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 263 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 349 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 378 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 272 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 190 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 197 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 225 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 347 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 254 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 177 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 243 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 385 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 287 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF472NFV 433 bp overlap
ChIP neural progenitor cell ENCFF472NFV 353 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 241 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 228 bp overlap
FOXP4 2 datasets
ChIP WTC11 ENCFF708TAF 347 bp overlap
ChIP WTC11 ENCFF708TAF 264 bp overlap
Foxn1 1 dataset
Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 203 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 208 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 145 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 278 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 212 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 321 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 229 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 433 bp overlap
MAX 5 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF507HCX 247 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 146 bp overlap
ChIP WTC11 ENCFF223QFY 427 bp overlap
ChIP WTC11 ENCFF223QFY 392 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 200 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 433 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 310 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 389 bp overlap
ChIP hESC GSE18292.NANOG.hESC 199 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 164 bp overlap
PGR 9 datasets
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 433 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 418 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 416 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 289 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 433 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 433 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 433 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 433 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 433 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 382 bp overlap
ChIP H1 ENCFF566JSR 187 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 209 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 320 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 433 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 433 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 412 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 201 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 134 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 309 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 82 bp overlap
REST 2 datasets
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP H1 ENCFF429RUE 245 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 110 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 241 bp overlap
SCRT1 1 dataset
Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 94 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 222 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 410 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 394 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 287 bp overlap
ChIP hESC GSE18292.SOX2.hESC 188 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 433 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 271 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPI1 8 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 75 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 56 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 147 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 133 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 53 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 53 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 52 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 50 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 389 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 186 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 199 bp overlap
TBP 2 datasets
ChIP hESC_2h GSE122298.TBP.hESC_2h 155 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 68 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 274 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TEAD1 2 datasets
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 348 bp overlap
TEAD2 1 dataset
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
ChIP HepG2 ENCFF054UUL 356 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 360 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 258 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 166 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 234 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 367 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 433 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 433 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 191 bp overlap
TGIF2 1 dataset
ChIP HepG2 ENCFF421ZJN 409 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 363 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 187 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 433 bp overlap
ZNF235 1 dataset
ChIP HepG2 ENCFF831SQZ 152 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 374 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 284 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 229 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 433 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 215 bp overlap
ZNF670 1 dataset
ChIP HepG2 ENCFF684IKN 69 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF816 1 dataset
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif ES_0h ES_0h-ZSCAN31_MA1722.2 18 bp overlap