chr2 : 120,216,352 – 120,216,602
250 bp 106 TFs 2 linked genes
This 250 bp open chromatin element is linked to ENSG00000224789 and TMEM185B and is bound by 106 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000224789 at TSS At TSS Proximity
TMEM185B 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:120,211,352 – 120,221,602
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 238 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 173 bp overlap
ATF6 2 datasets
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Motif DE_24h DE_24h-ATF6_MA1466.2 13 bp overlap
ATXN7L3 1 dataset
ChIP HCT-116_thaps GSE121798.ATXN7L3.HCT-116_thaps 179 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 201 bp overlap
BRD2 4 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 213 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 245 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 165 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 154 bp overlap
BRD4 6 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 89 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 212 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 249 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 77 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 65 bp overlap
ChIP hESC GSE33281.BRD4.hESC 109 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 250 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 61 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 92 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 169 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 234 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 175 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 223 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 220 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 217 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 182 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 249 bp overlap
FOXO1::ELK1 3 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
GATA6 2 datasets
ChIP OACP4-C GSE132680.GATA6.OACP4-C 250 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 152 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 100 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 219 bp overlap
IKZF1 3 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif ES_0h ES_0h-IKZF1_MA1508.2 8 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF5 4 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 250 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 119 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 250 bp overlap
ChIP YCC-3 GSE51705.KLF5.YCC-3 128 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 166 bp overlap
MAX 1 dataset
ChIP HCT116 ENCFF810LEN 250 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 78 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 250 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 244 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 109 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 139 bp overlap
NCBP1 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NCBP1.DLD-1_NELFCD-AID 232 bp overlap
NELFCD 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 250 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.NELFCD.DLD-1_NELFCD-AID_treated 157 bp overlap
NELFE 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 231 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.NELFE.DLD-1_NELFE-AID 166 bp overlap
ChIP HCT-116 GSE132705.NELFE.HCT-116 168 bp overlap
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 187 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 217 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 180 bp overlap
NRF1 4 datasets
ChIP H1 ENCFF582PEJ 197 bp overlap
ChIP HCT-116_D4_NonT GSE152144.NRF1.HCT-116_D4_NonT 117 bp overlap
ChIP HCT-116_H1_NonT GSE152144.NRF1.HCT-116_H1_NonT 216 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 160 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 250 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 250 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 250 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 250 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 240 bp overlap
PAX5 1 dataset
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 175 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 250 bp overlap
ChIP HCT116 ENCFF508RDJ 234 bp overlap
ChIP HCT116 ENCFF849NGT 250 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 157 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 211 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 250 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 82 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 195 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 241 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 225 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 234 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 148 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SIN3A 1 dataset
ChIP HCT116 ENCFF203YBB 250 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 250 bp overlap
SMAD3 2 datasets
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 57 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 84 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 209 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 71 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 188 bp overlap
SP1 2 datasets
ChIP HCT116 ENCFF800LBN 250 bp overlap
ChIP WTC11 ENCFF688PEU 250 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 250 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 211 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 249 bp overlap
SUPT5H 9 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 250 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 239 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 202 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 192 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 206 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 169 bp overlap
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 214 bp overlap
ChIP HCT-116_Nut3_pThr806 GSE138548.SUPT5H.HCT-116_Nut3_pThr806 139 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 234 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 250 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 122 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 210 bp overlap
TCF12 1 dataset
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
TCF3 1 dataset
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 125 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 250 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 175 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 236 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 136 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 170 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 162 bp overlap
XBP1 2 datasets
Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap
Motif DE_24h DE_24h-XBP1_MA0844.2 11 bp overlap
XRN2 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.XRN2.DLD-1_NELFCD-AID_treated 151 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 183 bp overlap
ChIP HCT116 ENCFF497ZQZ 154 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB33 1 dataset
ChIP HCT116 ENCFF847AJN 181 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 242 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 250 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 206 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFX 3 datasets
ChIP HCT-116 GSE102616.ZFX.HCT-116 250 bp overlap
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 250 bp overlap
ChIP HCT116 ENCFF324IZY 250 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_24h DE_24h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Zfx 3 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap