chr2 : 161,621,748 – 161,621,888
140 bp 12 TFs 2 linked genes
This 140 bp open chromatin element is linked to SLC4A10 and ENSG00000288091 and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC4A10 2.6 kb Proximal Proximity
ENSG00000288091 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:161,616,748 – 161,626,888
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 140 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 99 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 140 bp overlap
ChIP DE DE-FOXA2-2 140 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 140 bp overlap
ChIP DE DE-GATA4-2 140 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 140 bp overlap
IRF4 1 dataset
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 74 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 79 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 67 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 140 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 120 bp overlap
SPI1 1 dataset
ChIP EM-3 GSE128834.SPI1.EM-3 55 bp overlap