chr2 : 172,436,080 – 172,436,562
482 bp 32 TFs 2 linked genes
This 482 bp open chromatin element is linked to ENSG00000226963 and ITGA6 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000226963 7.5 kb Proximal Proximity
ITGA6 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:172,431,080 – 172,441,562
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AKAP8L 1 dataset
ChIP HepG2 ENCFF244QDL 254 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 350 bp overlap
CTCF 1 dataset
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
DMRT3 1 dataset
Motif DE_72h DE_72h-DMRT3_MA0610.2 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 296 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 378 bp overlap
ChIP DE DE-FOXA2-2 336 bp overlap
GATA2 2 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 217 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 482 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 482 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 258 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 396 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 214 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 92 bp overlap
MEF2A 1 dataset
Motif DE_72h DE_72h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_72h DE_72h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_72h DE_72h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_72h DE_72h-MEF2D_MA0773.1 12 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 192 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 355 bp overlap
RBPJ 1 dataset
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 147 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 220 bp overlap
RORC 1 dataset
Motif DE_72h DE_72h-RORC_MA1151.2 10 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap
SOX18 1 dataset
ChIP HepG2 ENCFF348QIP 276 bp overlap
Six3 1 dataset
Motif DE_72h DE_72h-Six3_MA0631.2 11 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 212 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZBTB32 1 dataset
Motif DE_72h DE_72h-ZBTB32_MA1580.1 10 bp overlap
ZKSCAN3 1 dataset
Motif DE_72h DE_72h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF709 1 dataset
ChIP HepG2 ENCFF151DHM 74 bp overlap