chr2 : 174,053,124 – 174,054,219
1,095 bp 132 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to SP3 and OLA1 and is bound by 132 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SP3 88.2 kb Distal Multiome
OLA1 195.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:174,048,124 – 174,059,219
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 399 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 747 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 597 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 317 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 158 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 493 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 675 bp overlap
BRD2 3 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 466 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 194 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 333 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 1016 bp overlap
BRD4 7 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 394 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 266 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 551 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 172 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 424 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 381 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 981 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 121 bp overlap
CEBPB 1 dataset
ChIP A-549 ENCSR000BUB.CEBPB.A-549 130 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 182 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 230 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 275 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 537 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 492 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 368 bp overlap
DMAP1 2 datasets
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 293 bp overlap
ChIP HepG2 ENCFF247MSU 391 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 233 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
ERG 3 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 249 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 155 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 135 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 393 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 209 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 4 datasets
ChIP GM23338 ENCFF613YON 180 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 94 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 241 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 155 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 322 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 288 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 297 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 643 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 615 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 448 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1061 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 726 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 651 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 262 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 166 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 216 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 291 bp overlap
GTF3A 1 dataset
ChIP HepG2 ENCFF268DGX 623 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 248 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 255 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 207 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 144 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 354 bp overlap
HNF4A 3 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 382 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 217 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 312 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 205 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 717 bp overlap
ChIP K562 ENCFF348IBL 382 bp overlap
ChIP K562 ENCFF771OHZ 400 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 163 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 152 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 261 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 331 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 514 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 260 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 591 bp overlap
KDM5B 2 datasets
ChIP SUM159 GSE46055.KDM5B.SUM159 156 bp overlap
ChIP SUM185 GSE46055.KDM5B.SUM185 126 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 494 bp overlap
MED1 3 datasets
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 467 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 505 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 455 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 243 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 251 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 561 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 82 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 161 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
NR2E3 2 datasets
ChIP A549 ENCFF833WDR 351 bp overlap
ChIP A549 ENCFF833WDR 351 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
PCBP2 4 datasets
ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 619 bp overlap
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 579 bp overlap
ChIP HepG2 ENCFF033VWK 405 bp overlap
ChIP HepG2 ENCFF033VWK 405 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 292 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 278 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 665 bp overlap
POLR2A 1 dataset
ChIP A549 ENCFF748RAW 311 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 210 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 908 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 404 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 133 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 168 bp overlap
PPARG 2 datasets
ChIP ASC GSE21366.PPARG.ASC 442 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 370 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 174 bp overlap
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 139 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 139 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 543 bp overlap
RBPJ 1 dataset
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 469 bp overlap
REST 3 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 283 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 260 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 97 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 725 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 553 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 494 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 191 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 476 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 232 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 706 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 284 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 916 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 574 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 602 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 553 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 648 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 704 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 94 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 168 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 468 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 245 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 1067 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 431 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 194 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 250 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 240 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 315 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 488 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 176 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 341 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 241 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 743 bp overlap
SP1 4 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 298 bp overlap
ChIP A-549 ENCSR000BPE.SP1.A-549 83 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 236 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 6 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 234 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 123 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 158 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 289 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 251 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 366 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 298 bp overlap
SUZ12 1 dataset
ChIP WA01 ENCSR000ATS.SUZ12.WA01 281 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 327 bp overlap
TAF1 1 dataset
ChIP A-549 ENCSR000BPF.TAF1.A-549 360 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 179 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 250 bp overlap
TCF12 3 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 428 bp overlap
ChIP A-549 ENCSR000BQQ.TCF12.A-549 189 bp overlap
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 256 bp overlap
TCF7L2 1 dataset
ChIP LNCaP GSE51621.TCF7L2.LNCaP 231 bp overlap
TEAD1 1 dataset
ChIP CCLP1 GSE62272.TEAD1.CCLP1 173 bp overlap
TEAD4 2 datasets
ChIP BJ_fibroblast GSE114367.TEAD4.BJ_fibroblast 180 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 268 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 533 bp overlap
TFAP2E 1 dataset
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TP53 2 datasets
ChIP H9 GSE39912.TP53.H9 225 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 399 bp overlap
TP63 6 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 274 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 117 bp overlap
ChIP foreskin GSE126390.TP63.foreskin 156 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 216 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 233 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 225 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 472 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
XRCC5 4 datasets
ChIP HepG2 ENCFF330PDO 485 bp overlap
ChIP HepG2 ENCFF330PDO 485 bp overlap
ChIP HepG2 ENCFF680LVJ 481 bp overlap
ChIP HepG2 ENCFF680LVJ 287 bp overlap
YY1 1 dataset
ChIP A-549 ENCSR000BPM.YY1.A-549 218 bp overlap
ZBTB5 1 dataset
ChIP K-562 ENCSR389PWB.ZBTB5.K-562 247 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 269 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 691 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF556 1 dataset
ChIP HepG2 ENCFF008WIK 452 bp overlap
ZNF677 1 dataset
ChIP HEK293 ENCFF220HCQ 277 bp overlap
ZNF708 1 dataset
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap