chr2 : 201,148,432 – 201,148,970
538 bp 63 TFs 2 linked genes
This 538 bp open chromatin element is linked to CFLAR and IMPDH1P10 and is bound by 63 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CFLAR at TSS At TSS Proximity
IMPDH1P10 8.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:201,143,432 – 201,153,970
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 4 datasets
ChIP VCaP GSE148358.AR.VCaP 277 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 86 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 205 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 201 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 216 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 295 bp overlap
ATF1 1 dataset
ChIP HepG2 ENCFF239LTQ 404 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 217 bp overlap
BRD4 13 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 223 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 538 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 329 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 122 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 180 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 108 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 77 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 73 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 108 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 282 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 266 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 527 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 122 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 275 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 251 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 244 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 122 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 196 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 163 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 220 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 141 bp overlap
FOXA1 14 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 303 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 155 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 158 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 452 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 91 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 163 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 180 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 224 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 202 bp overlap
ChIP prostate_2484 GSE130408.FOXA1.prostate_2484 189 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 219 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 164 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 233 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 255 bp overlap
ChIP DE DE-FOXA2-1 449 bp overlap
ChIP DE DE-FOXA2-2 538 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 516 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 354 bp overlap
ChIP DE DE-GATA4-1 465 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 478 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 538 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 538 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 438 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 538 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 415 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 59 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 52 bp overlap
HOXB13 22 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 169 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 178 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 86 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 299 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 154 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 253 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 221 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 302 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 318 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 200 bp overlap
ChIP prostate_P1 GSE130408.HOXB13.prostate_P1 162 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 241 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 248 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 209 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 231 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 304 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 389 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 196 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 333 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 239 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 177 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 280 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 126 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 246 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 298 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 259 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 184 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 75 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 164 bp overlap
MBD4 1 dataset
ChIP HepG2 ENCFF785HSD 113 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 410 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 189 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 465 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 50 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 83 bp overlap
MLLT1 1 dataset
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 125 bp overlap
NCOR1 1 dataset
ChIP HepG2 ENCFF685NAH 51 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 201 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 202 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 304 bp overlap
NKX2-1 1 dataset
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 159 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 161 bp overlap
NR2F2 1 dataset
ChIP HepG2 ENCFF483TVJ 65 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 75 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 341 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 125 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 132 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 56 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 274 bp overlap
POLR2A 4 datasets
ChIP prostate gland ENCFF881OMH 165 bp overlap
ChIP transverse colon ENCFF193UMS 434 bp overlap
ChIP transverse colon ENCFF607LKE 185 bp overlap
ChIP transverse colon ENCFF610RWV 180 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF241AEG 437 bp overlap
ChIP HepG2 ENCFF241AEG 232 bp overlap
ChIP HepG2 ENCFF508UTS 427 bp overlap
ChIP HepG2 ENCFF508UTS 225 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 143 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 165 bp overlap
PRDM1 3 datasets
ChIP A549 ENCFF012KDW 257 bp overlap
ChIP A549 ENCFF012KDW 88 bp overlap
ChIP HEK293 ENCFF302TBP 421 bp overlap
RAD21 1 dataset
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 442 bp overlap
RARB 1 dataset
ChIP SK-N-SH ENCFF475WOR 154 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 114 bp overlap
RELA 4 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 206 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 106 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 235 bp overlap
ChIP mammary-epithelial-cell_IL1 GSE71069.RELA.mammary-epithelial-cell_IL1 51 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 136 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 245 bp overlap
SMARCA4 6 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 300 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 232 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 63 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 151 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 55 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 243 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 279 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 489 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 78 bp overlap
SNAI2 2 datasets
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 447 bp overlap
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 318 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 355 bp overlap
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 356 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 193 bp overlap
THAP7 1 dataset
ChIP HepG2 ENCFF034KPY 449 bp overlap
TP63 2 datasets
ChIP A549 ENCFF399JYQ 317 bp overlap
ChIP A549 ENCFF399JYQ 171 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 441 bp overlap
ZNF624 1 dataset
ChIP A549 ENCFF802OXN 140 bp overlap