chr2 : 214,814,232 – 214,814,439
207 bp 13 TFs 2 linked genes
This 207 bp open chromatin element is linked to SNHG31 and BARD1 and is bound by 13 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SNHG31 4.0 kb Proximal Proximity
BARD1 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:214,809,232 – 214,819,439
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
FOXA1 6 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 191 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 190 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 139 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 207 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 123 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 207 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 207 bp overlap
ChIP DE DE-FOXA2-2 207 bp overlap
ChIP HepG2 ENCFF533COJ 207 bp overlap
ChIP HepG2 ENCFF570ABM 169 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 188 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 207 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 119 bp overlap
GATA4 2 datasets
ChIP foregut GSE117136.GATA4.foregut 207 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 207 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 207 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 207 bp overlap
ChIP foregut GSE117136.GATA6.foregut 207 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 207 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 207 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 207 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 145 bp overlap
ChIP K562 ENCFF771OHZ 123 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 153 bp overlap
REPIN1 1 dataset
ChIP HepG2 ENCFF598VSY 92 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 103 bp overlap
TAL1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 130 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 182 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 185 bp overlap