chr3 : 17,745,386 – 17,745,580
194 bp 20 TFs 2 linked genes
This 194 bp open chromatin element is linked to ENSG00000286352 and TBC1D5 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286352 2.4 kb Proximal Proximity
TBC1D5 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:17,740,386 – 17,750,580
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 100 bp overlap
ChIP MCF-7 ENCFF414SZG 163 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 164 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 142 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 139 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 167 bp overlap
GRHL2 6 datasets
ChIP LNCaP GSE80256.GRHL2.LNCaP 194 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 155 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 149 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 194 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 156 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 143 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 134 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 103 bp overlap
ChIP K562 ENCFF320EQC 194 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 145 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 90 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 194 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 141 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 194 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 194 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 194 bp overlap
RELA 2 datasets
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 194 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 121 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 76 bp overlap
TP63 1 dataset
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 149 bp overlap
USF1 12 datasets
ChIP H1 ENCFF090WVU 183 bp overlap
ChIP HCT116 ENCFF330PYP 194 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 135 bp overlap
ChIP HepG2 ENCFF201JKA 144 bp overlap
ChIP HepG2 ENCFF807KYJ 181 bp overlap
ChIP Ishikawa ENCFF728IEG 192 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 146 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 184 bp overlap
ChIP K562 ENCFF202SFC 194 bp overlap
ChIP K562 ENCFF633EZB 192 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 130 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 194 bp overlap
USF2 2 datasets
ChIP Hep-G2 GSE97661.USF2.Hep-G2 183 bp overlap
ChIP K562 ENCFF397QGU 194 bp overlap