chr3 : 23,922,421 – 23,923,129
708 bp 17 TFs 2 linked genes
This 708 bp open chromatin element is linked to RPL15 and NKIRAS1 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPL15 5.3 kb Proximal Proximity
NKIRAS1 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:23,917,421 – 23,928,129
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 235 bp overlap
ChIP BLaER1 ENCFF274GAT 284 bp overlap
ChIP BLaER1 ENCFF844FIP 85 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 224 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 314 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 342 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 261 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF262YXJ 297 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 351 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 507 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 103 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 125 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCFF308WOW 281 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 225 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 265 bp overlap
ZNF460 1 dataset
ChIP HepG2 ENCFF007NNM 339 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCFF906MQV 224 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 77 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 343 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 287 bp overlap