chr3 : 24,525,844 – 24,526,431
587 bp 16 TFs 2 linked genes
This 587 bp open chromatin element is linked to ENSG00000272554 and ENSG00000265028 and is bound by 16 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000272554 3.4 kb Proximal Proximity
ENSG00000265028 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:24,520,844 – 24,531,431
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 341 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 80 bp overlap
FOXA1 1 dataset
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 54 bp overlap
KDM1A 3 datasets
ChIP HepG2 ENCFF240UWG 232 bp overlap
ChIP K562 ENCFF128TYE 132 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 111 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 522 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 242 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 181 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 240 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 297 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 317 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 362 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 91 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 386 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 88 bp overlap
ChIP K562 ENCFF361LXT 83 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 71 bp overlap
ChIP HepG2 ENCFF490FFQ 83 bp overlap