chr3 : 49,908,452 – 49,908,788
336 bp 53 TFs 2 linked genes
This 336 bp open chromatin element is linked to ENSG00000228008 and MST1R and is bound by 53 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000228008 4.6 kb Proximal Proximity
MST1R 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:49,903,452 – 49,913,788
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 106 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 74 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 153 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 336 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 242 bp overlap
BRD4 4 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 336 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 186 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 253 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 336 bp overlap
CTCF 1 dataset
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 206 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 194 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 86 bp overlap
EGR1 1 dataset
ChIP K562 ENCFF006PJY 245 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 127 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 222 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 216 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 201 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 87 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 197 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 209 bp overlap
ChIP erythroblast ENCFF867JAR 336 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 336 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 224 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 336 bp overlap
ChIP DE DE-GATA4-2 336 bp overlap
ChIP foregut GSE117136.GATA4.foregut 253 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 336 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 336 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 336 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 336 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 336 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 232 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 169 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 332 bp overlap
ChIP foregut GSE117136.GATA6.foregut 332 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 336 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 301 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 309 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 255 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR075HTM.HDAC2.K-562 302 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 310 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 303 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 311 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 139 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 178 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 227 bp overlap
MAZ 3 datasets
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 152 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 181 bp overlap
ChIP K562 ENCFF333ZIV 302 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 336 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 84 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 274 bp overlap
ChIP hESC GSE18292.NANOG.hESC 95 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 130 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 120 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 305 bp overlap
POLR2A 1 dataset
ChIP erythroblast ENCFF498VMR 336 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 313 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 312 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 336 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 336 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 336 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 336 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 268 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 336 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 307 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 214 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 336 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 134 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TAL1 2 datasets
ChIP CD34 GSE52924.TAL1.CD34 151 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 149 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 187 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 336 bp overlap
XRCC5 3 datasets
ChIP K-562 GSE120104.XRCC5.K-562 130 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 72 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 141 bp overlap
ZBTB7A 2 datasets
ChIP K-562 GSE103445.ZBTB7A.K-562 175 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 97 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 327 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 336 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 336 bp overlap
ChIP K562 ENCFF352SDL 336 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 336 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 322 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 233 bp overlap