chr3 : 100,263,026 – 100,263,491
465 bp 51 TFs 2 linked genes
This 465 bp open chromatin element is linked to TBC1D23 and ENSG00000287378 and is bound by 51 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TBC1D23 2.0 kb Proximal Proximity
ENSG00000287378 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:100,258,026 – 100,268,491
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 92 bp overlap
ChIP K562 ENCFF938UXQ 272 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 60 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 74 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 164 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 130 bp overlap
ChIP K562 ENCFF673OEZ 235 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 389 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF739JDE 274 bp overlap
ChIP K562 ENCFF775HUO 260 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 89 bp overlap
EGR1 1 dataset
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
GATA1 7 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 79 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 78 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 50 bp overlap
ChIP erythroblast ENCFF867JAR 153 bp overlap
ChIP erythroblast ENCFF867JAR 465 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 465 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 131 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 181 bp overlap
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
GATA6 1 dataset
ChIP DE_D1 S14-DE-d1-GATA6-exp1 182 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 335 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 88 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF744ALD 180 bp overlap
HES1 1 dataset
ChIP K562 ENCFF919JVU 154 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 284 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 299 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 347 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 116 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 102 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 465 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 112 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 196 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 50 bp overlap
ChIP K562 ENCFF788MPU 162 bp overlap
ChIP K562 ENCFF866HRM 186 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 128 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 180 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 63 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF262YXJ 365 bp overlap
ChIP K562 ENCFF514URW 269 bp overlap
SMARCA4 2 datasets
ChIP K562 ENCFF316MCJ 122 bp overlap
ChIP K562 ENCFF506JCB 222 bp overlap
TAL1 4 datasets
ChIP K-562 GSE107726.TAL1.K-562 101 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 64 bp overlap
ChIP K562 ENCFF620GMX 193 bp overlap
ChIP K562 ENCFF661CCK 214 bp overlap
TBP 1 dataset
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 200 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 265 bp overlap
TEAD4 2 datasets
ChIP K562 ENCFF673NIK 261 bp overlap
ChIP K562 ENCFF673NIK 365 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 314 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 84 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 97 bp overlap
ChIP K562 ENCFF521DSV 167 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 149 bp overlap
ZFX 2 datasets
ChIP K562 ENCFF536AJO 330 bp overlap
ChIP K562 ENCFF536AJO 465 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF335 4 datasets
ChIP HEK293 ENCFF784SLD 432 bp overlap
ChIP HEK293 ENCFF784SLD 273 bp overlap
ChIP HEK293 ENCFF784SLD 198 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 127 bp overlap
ZNF512 2 datasets
ChIP K562 ENCFF601EMZ 295 bp overlap
ChIP K562 ENCFF601EMZ 95 bp overlap
ZSCAN29 1 dataset
ChIP K562 ENCFF797SOU 274 bp overlap