chr3 : 109,340,697 – 109,341,112
415 bp 4 TFs 2 linked genes
This 415 bp open chromatin element is linked to ENSG00000289358 and DPPA4 and is bound by Cebpa, NR2F2, POU5F1_M, and SMAD2_3.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289358 2.9 kb Proximal Proximity
DPPA4 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:109,335,697 – 109,346,112
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
4 transcription factors
Source
Cell type
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 400 bp overlap
ChIP BLaER1 ENCFF093OYK 232 bp overlap
ChIP BLaER1 ENCFF364PUR 213 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 375 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 179 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 209 bp overlap
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