chr3 : 111,863,071 – 111,863,410
339 bp 37 TFs 2 linked genes
This 339 bp open chromatin element is linked to ENSG00000286492 and PHLDB2 and is bound by 37 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000286492 2.3 kb Proximal Proximity
PHLDB2 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:111,858,071 – 111,868,410
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 216 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 258 bp overlap
BRD4 11 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 236 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 339 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 222 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 89 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 172 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 326 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 295 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 277 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 339 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 339 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 339 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 95 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 59 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 250 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 305 bp overlap
ESR1 1 dataset
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 228 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 339 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 175 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 82 bp overlap
ChIP DE DE-GATA4-2 176 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 65 bp overlap
ChIP DE DE-GATA6-2 339 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 113 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 204 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 262 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 326 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 287 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 222 bp overlap
MED1 5 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 219 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 339 bp overlap
ChIP cardiomyocyte GSE85628.MED1.cardiomyocyte 276 bp overlap
ChIP cardiomyocyte_1 GSE85628.MED1.cardiomyocyte_1 276 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 173 bp overlap
MYC 3 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 155 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 216 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 106 bp overlap
MYCN 5 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 204 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 312 bp overlap
ChIP IMR-5_CD532 GSE78957.MYCN.IMR-5_CD532 135 bp overlap
ChIP IMR-5_DMSO GSE78957.MYCN.IMR-5_DMSO 147 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 161 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 339 bp overlap
NEUROG2 5 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 291 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 301 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 289 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 240 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 239 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 218 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 247 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF773DNG 251 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 193 bp overlap
RAD21 1 dataset
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 290 bp overlap
RELA 1 dataset
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 151 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 339 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 110 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 324 bp overlap
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 298 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 218 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 191 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 284 bp overlap
SUPT5H 1 dataset
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 103 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 148 bp overlap
TBX5 2 datasets
ChIP G296S_4 GSE85628.TBX5.G296S_4 152 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 198 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 169 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 176 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 335 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 303 bp overlap
ZNF281 1 dataset
ChIP HepG2 ENCFF585QNU 200 bp overlap