chr3 : 112,566,578 – 112,566,873
295 bp 8 TFs 2 linked genes
This 295 bp open chromatin element is linked to SLC35A5 and ATG3 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SLC35A5 4.5 kb Proximal Proximity
ATG3 4.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:112,561,578 – 112,571,873
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 155 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 295 bp overlap
ChIP DE DE-FOXA2-2 253 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 116 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 239 bp overlap
ChIP DE DE-GATA4-1 295 bp overlap
ChIP DE DE-GATA4-2 295 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 295 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 295 bp overlap
GATA6 6 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 247 bp overlap
ChIP DE DE-GATA6-1 295 bp overlap
ChIP DE DE-GATA6-2 295 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 295 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 295 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 65 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 251 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap