chr3 : 122,390,522 – 122,390,974
452 bp 79 TFs 2 linked genes
This 452 bp open chromatin element is linked to FAM162A and MIX23 and is bound by 79 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
FAM162A 6.3 kb Proximal Proximity
MIX23 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:122,385,522 – 122,395,974
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 354 bp overlap
ChIP K562 ENCFF938UXQ 229 bp overlap
Ascl2 2 datasets
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BCL11A 6 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 62 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 69 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 54 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 63 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 106 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 134 bp overlap
BHLHE22 2 datasets
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_72h DE_72h-Bhlha15_MA1472.3 8 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 393 bp overlap
ChIP K562 ENCFF963TXY 381 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 373 bp overlap
ChIP K562 ENCFF673OEZ 325 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 138 bp overlap
EGR1 1 dataset
ChIP monocyte GSE136216.EGR1.monocyte 199 bp overlap
EHF 1 dataset
Motif DE_72h DE_72h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_72h DE_72h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 147 bp overlap
ELF2 1 dataset
Motif DE_72h DE_72h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_72h DE_72h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_72h DE_72h-ELF4_MA0641.1 12 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ETV1 1 dataset
Motif DE_72h DE_72h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 361 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 415 bp overlap
ChIP DE DE-FOXA2-2 311 bp overlap
GABPA 1 dataset
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 217 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 101 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 330 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 190 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 195 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 224 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
ChIP erythroblast ENCFF867JAR 452 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 436 bp overlap
GATA2 2 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 142 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 452 bp overlap
ChIP DE DE-GATA4-2 436 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 364 bp overlap
ChIP DE DE-GATA6-2 433 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 76 bp overlap
ChIP liver ENCFF449HPV 138 bp overlap
ChIP liver ERP002306.HNF4A.liver 119 bp overlap
IKZF1 1 dataset
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 195 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 423 bp overlap
MSC 2 datasets
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
Motif DE_72h DE_72h-MSC_MA0665.1 10 bp overlap
MYF5 2 datasets
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
MYF6 2 datasets
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
MYOG 2 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 257 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 226 bp overlap
ChIP K562 ENCFF788MPU 412 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 104 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 259 bp overlap
NHLH1 2 datasets
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 243 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 179 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PKNOX2 2 datasets
Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_72h DE_72h-PKNOX2_MA0783.1 12 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 199 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 307 bp overlap
Prdm14 2 datasets
Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap
Motif DE_72h DE_72h-Prdm14_MA1998.2 8 bp overlap
Ptf1A 4 datasets
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 290 bp overlap
SFPQ 1 dataset
ChIP LTAD_DHT-1nM GSE94577.SFPQ.LTAD_DHT-1nM 77 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 307 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 254 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 216 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 130 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 402 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 253 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 207 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 245 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 240 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 287 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 230 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 277 bp overlap
ChIP K562 ENCFF620GMX 210 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 264 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 313 bp overlap
ChIP K562 ENCFF931DJY 375 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 254 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 241 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 176 bp overlap
TFAP4 2 datasets
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Motif DE_72h DE_72h-TFAP4_MA0691.1 10 bp overlap
TGIF1 2 datasets
Motif DE_60h DE_60h-TGIF1_MA0796.1 12 bp overlap
Motif DE_72h DE_72h-TGIF1_MA0796.1 12 bp overlap
TGIF2 2 datasets
Motif DE_60h DE_60h-TGIF2_MA0797.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 2 datasets
Motif DE_60h DE_60h-TGIF2LX_MA1571.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 2 datasets
Motif DE_60h DE_60h-TGIF2LY_MA1572.1 12 bp overlap
Motif DE_72h DE_72h-TGIF2LY_MA1572.1 12 bp overlap
Tcf12 2 datasets
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Tcf21 2 datasets
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Motif DE_72h DE_72h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 162 bp overlap
ZBTB18 2 datasets
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 76 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 372 bp overlap
ZNF175 1 dataset
Motif DE_72h DE_72h-ZNF175_MA2332.1 9 bp overlap