chr3 : 146,406,147 – 146,407,029
882 bp 8 TFs 2 linked genes
This 882 bp open chromatin element is linked to ENSG00000241358 and ENSG00000293191 and is bound by 8 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000241358 9.5 kb Proximal Proximity
ENSG00000293191 9.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:146,401,147 – 146,412,029
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
8 transcription factors
Source
Cell type
AR 11 datasets
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 115 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 220 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 222 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 234 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 189 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 168 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 212 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 176 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 217 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 177 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 196 bp overlap
FOXA1 2 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 163 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 149 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 797 bp overlap
ChIP DE DE-FOXA2-2 651 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 590 bp overlap
ChIP DE DE-GATA4-2 673 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 617 bp overlap
ChIP DE DE-GATA6-2 673 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 265 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 181 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 155 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 87 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 79 bp overlap
PGR 5 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 211 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 341 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 332 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 279 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 321 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap