chr3 : 146,411,491 – 146,412,037
546 bp 7 TFs 2 linked genes
This 546 bp open chromatin element is linked to ENSG00000241358 and ENSG00000293191 and is bound by 7 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000241358 4.5 kb Proximal Proximity
ENSG00000293191 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:146,406,491 – 146,417,037
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
7 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 128 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 477 bp overlap
ChIP DE DE-FOXA2-2 489 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 316 bp overlap
ChIP DE DE-GATA4-2 490 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 344 bp overlap
ChIP DE DE-GATA6-2 417 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 305 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 322 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 366 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 429 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 98 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 546 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 405 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 385 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 471 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 546 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 389 bp overlap