chr3 : 167,727,673 – 167,728,086
413 bp 23 TFs 2 linked genes
This 413 bp open chromatin element is linked to PDCD10 and SERPINI1 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PDCD10 6.4 kb Proximal Proximity
SERPINI1 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:167,722,673 – 167,733,086
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 124 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 181 bp overlap
ESR1 15 datasets
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 157 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 378 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 351 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 178 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 208 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 214 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 304 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 384 bp overlap
ChIP T-47D_E2 GSE72249.ESR1.T-47D_E2 308 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 344 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 292 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 174 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 372 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 245 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 351 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 407 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 90 bp overlap
FOXA1 16 datasets
ChIP T-47D GSE72249.FOXA1.T-47D 273 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 243 bp overlap
ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 203 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 272 bp overlap
ChIP T-47D_E2 GSE72249.FOXA1.T-47D_E2 306 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 224 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 268 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 154 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 146 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 238 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 253 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 245 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 386 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 376 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 386 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 277 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 140 bp overlap
ChIP DE DE-FOXA2-1 413 bp overlap
ChIP DE DE-FOXA2-2 413 bp overlap
ChIP HepG2 ENCFF533COJ 295 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 413 bp overlap
ChIP DE DE-GATA4-2 413 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 413 bp overlap
ChIP DE DE-GATA6-2 413 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 134 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 413 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 172 bp overlap
NR2F2 1 dataset
ChIP Hep-G2 ENCSR000BVM.NR2F2.Hep-G2 160 bp overlap
NR3C1 2 datasets
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 220 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 142 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 264 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 349 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 353 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 338 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 352 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 371 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 211 bp overlap